Application of molecular markers in plant genome analysis: a review

被引：44
作者：
Adhikari S. [1 ]
Saha S. [1 ,2 ]
Biswas A. [3 ]
Rana T.S. [4 ]
Bandyopadhyay T.K. [5 ]
Ghosh P. [1 ]
机构：
[1] Cytogenetics and Plant Breeding Section, Plant Biotechnology Research Unit, Department of Botany, University of Kalyani, Kalyani, Nadia, 741235, West Bengal
[2] Cytogenetics and Plant Breeding Section, Department of Sericulture, Raiganj University, Uttar Dinajpur, 733134, West Bengal
[3] Department of Biotechnology, Vidyasagar University, Rangamati, Medinipur, 721102, West Bengal
[4] Molecular Systematics/Plant Biodiversity & Conservation Biology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow
[5] Department of Molecular Biology and Biotechnology, University of Kalyani, Kalyani, Nadia, 741235, West Bengal
来源：
The Nucleus | 2017年 / 60卷 / 3期
关键词：
Genic molecular markers; Polymerase chain reaction; Random DNA markers; Sequence polymorphism;
D O I：
10.1007/s13237-017-0214-7
中图分类号：
学科分类号：
摘要：
Advancement in the field of molecular biology has led to the development of various molecular markers which has revolutionized our understanding of the organization and evolution of plant genomes. Detection of genetic variation in plants offers an opportunity to understand the molecular basis of several biological phenomena. The reliability and efficiency of restriction digestion and polymerase chain reaction based random DNA markers have already proved their utility in taxonomical, evolutionary and ecological studies of plants. Progresses in the field of genomics and transcriptomics have enabled plant researchers to develop molecular markers derived from exon region of the genome which are termed as genic molecular markers (GMMs). GMMs are the part of the cDNA/EST sequences that mainly characterize the functional part of the genome. Next-generation DNA sequencing has also significantly contributed towards development of microRNA specific novel functional markers at the DNA level. This review focuses on the technical aspects of different molecular markers and their applications in the genome analysis. © 2017, Archana Sharma Foundation of Calcutta.
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页码：283 / 297
页数：14
相关论文
共 122 条
  • [1] Abdel-Rahman M.M., Bayoumi S.R., Barakat M.N., Identification of molecular markers linked to Fusarium ear rot genes in maize plants Zea mays L, Biotechnol Biotechnol Equip, 30, pp. 692-699, (2016)
  • [2] Adams M.D., Kelley J.M., Gocayne J.D., Dubnick M., Polymeropoulos M.H., Xiao H., Et al., Complementary DNA sequencing: expressed sequence tags and the human genome project, Science, 252, pp. 1651-1656, (1991)
  • [3] Agarwal M., Shrivastava N., Padh H., Advances in molecular marker techniques and their applications in plant sciences, Plant Cell Rep, 27, pp. 617-631, (2008)
  • [4] Andersen J.R., Schrag T., Melchinger A.E., Zein I., Lubberstedt T., Validation of Dwarf polymorphisms associated with flowering time in elite European inbred lines of maize (Zea mays L.), Theor Appl Genet, 111, pp. 206-217, (2005)
  • [5] Arnau G., Lallemand J., Bourgoin M., Fast and reliable strawberry cultivar identification using inter simple sequence repeat (ISSR) amplification, Euphytica, 129, pp. 69-79, (2002)
  • [6] Avise J.C., Molecular markers, natural history, and evolution, (1994)
  • [7] Becher S.A., Steinmetz K., Weising K., Boury S., Peltier D., Et al., Microsatellites for cultivar identification in Pelargonium, Theor Appl Genet, 101, pp. 643-651, (2000)
  • [8] Beebee T., Rowe G., An introduction to molecular ecology, (2004)
  • [9] Biffi R., Restivo F.M., Tassi F., Caporali E., Carboni A., Marziani G.P., Et al., A restriction fragment polymorphism probe for early diagnosis of gender in Asparagus officinalis L, Hort Sci, 30, pp. 1463-1464, (1995)
  • [10] Botstein D., White R.L., Skolnick M., Davis R.W., Construction of a genetic linkage map in man using restriction fragment length polymorphism, Am J Hum Genet, 32, pp. 314-331, (1980)
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