The contribution of cell cycle to heterogeneity in single-cell RNA-seq data

被引:0
作者
Andrew McDavid
Greg Finak
Raphael Gottardo
机构
[1] Andrew McDavid,Greg Finak and Raphael Gottardo are in the Vaccine and Infectious Disease Division
[2] Fred Hutchinson Cancer Research Center,undefined
[3] Seattle,undefined
[4] Washington,undefined
[5] USA.,undefined
来源
Nature Biotechnology | 2016年 / 34卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
页码:591 / 593
页数:2
相关论文
共 50 条
[31]   Phylogenetic inference from single-cell RNA-seq data [J].
Liu, Xuan ;
Griffiths, Jason I. ;
Bishara, Isaac ;
Liu, Jiayi ;
Bild, Andrea H. ;
Chang, Jeffrey T. .
SCIENTIFIC REPORTS, 2023, 13 (01)
[32]   PsiNorm: a scalable normalization for single-cell RNA-seq data [J].
Borella, Matteo ;
Martello, Graziano ;
Risso, Davide ;
Romualdi, Chiara .
BIOINFORMATICS, 2022, 38 (01) :164-172
[33]   Deep Learning for Clustering Single-cell RNA-seq Data [J].
Zhu, Yuan ;
Bai, Litai ;
Ning, Zilin ;
Fu, Wenfei ;
Liu, Jie ;
Jiang, Linfeng ;
Fei, Shihuang ;
Gong, Shiyun ;
Lu, Lulu ;
Deng, Minghua ;
Yi, Ming .
CURRENT BIOINFORMATICS, 2024, 19 (03) :193-210
[34]   SCell: integrated analysis of single-cell RNA-seq data [J].
Diaz, Aaron ;
Liu, Siyuan J. ;
Sandoval, Carmen ;
Pollen, Alex ;
Nowakowski, Tom J. ;
Lim, Daniel A. ;
Kriegstein, Arnold .
BIOINFORMATICS, 2016, 32 (14) :2219-2220
[35]   SCnorm: robust normalization of single-cell RNA-seq data [J].
Rhonda Bacher ;
Li-Fang Chu ;
Ning Leng ;
Audrey P Gasch ;
James A Thomson ;
Ron M Stewart ;
Michael Newton ;
Christina Kendziorski .
Nature Methods, 2017, 14 :584-586
[36]   Tracking intratumoral heterogeneity in glioblastoma via regularized classification of single-cell RNA-Seq data [J].
Marta B. Lopes ;
Susana Vinga .
BMC Bioinformatics, 21
[37]   Tumor Heterogeneity and Molecular Characteristics of Glioblastoma Revealed by Single-Cell RNA-Seq Data Analysis [J].
Yesudhas, Dhanusha ;
Dharshini, S. Akila Parvathy ;
Taguchi, Y-H ;
Gromiha, M. Michael .
GENES, 2022, 13 (03)
[38]   Generalized Cell Type Annotation and Discovery for Single-Cell RNA-Seq Data [J].
Zhai, Yuyao ;
Chen, Liang ;
Deng, Minghua .
THIRTY-SEVENTH AAAI CONFERENCE ON ARTIFICIAL INTELLIGENCE, VOL 37 NO 4, 2023, :5402-5410
[39]   SCSA: A Cell Type Annotation Tool for Single-Cell RNA-seq Data [J].
Cao, Yinghao ;
Wang, Xiaoyue ;
Peng, Gongxin .
FRONTIERS IN GENETICS, 2020, 11
[40]   Realistic Cell Type Annotation and Discovery for Single-cell RNA-seq Data [J].
Zhai, Yuyao ;
Chen, Liang ;
Deng, Minghua .
PROCEEDINGS OF THE THIRTY-SECOND INTERNATIONAL JOINT CONFERENCE ON ARTIFICIAL INTELLIGENCE, IJCAI 2023, 2023, :4967-4974