Species identification and phylogenetic analysis of genus Nassarius (Nassariidae) based on mitochondrial genes

被引:0
作者
Haitao Li
Duan Lin
Hongda Fang
Aijia Zhu
Yang Gao
机构
[1] State Oceanic Administration,South China Sea Environmental Monitoring Center
来源
Chinese Journal of Oceanology and Limnology | 2010年 / 28卷
关键词
species identification; mtCOI gene; mt16S rRNA gene;
D O I
暂无
中图分类号
学科分类号
摘要
Genus Nassarius contains many subgenera, such as Zeuxis, Telasco, Niotha, Varicinassa, Plicarcularia, Nassarius s. str. and Reticunassa. On the basis of morphological characteristics of the shell and radula and sequences of mitochondrial cytochrome oxidase subunit I (COI) and 16S rRNA genes, Nassarius specimens collected from the South China Sea were identified and phylogenetically analyzed. Although Nassarius sp. and Nassarius (Varicinassa) variciferus were morphologically different in their shells, few variations were found among their radular teeth and sequences of mtCOI and mt16S RNA genes. Therefore, Nassarius sp. should be classified as N. (Varicinassa) variciferus. Nassarius (Zeuxis) sp. has only a subtle difference from Nassarius (Zeuxis) algidus on the shell, but it shows obvious differences in radular teeth and DNA sequence, indicating that they are two distinct species. Sequence divergence of mtCOI and mt16S RNA genes within Nassarius species was much lower than that between species, suggesting that these two genes are suitable for Nassarius species identification. Phylogenetic analysis (neighbor-joining and maximum parsimony) based on mtCOI and mt16S rRNA genes revealed the presence of two groups in genus Nassarius and a closest relationship between subgenera Zeuxis and Telasco. Species of subgenus Plicarcularia did not form a single clade. The molecular phylogeny was not congruent with the previous morphological phylogeny. The subgeneric divisions of genus Nassarius appear to be uncertain and unreliable.
引用
收藏
页码:565 / 572
页数:7
相关论文
共 50 条
[31]   Identification of tuna species (Thunnini tribe) by PCR-RFLP analysis of mitochondrial DNA fragments [J].
Xu, Kunhua ;
Feng, Junli ;
Ma, Xuting ;
Wang, Xiao ;
Zhou, Dan ;
Dai, Zhiyuan .
FOOD AND AGRICULTURAL IMMUNOLOGY, 2016, 27 (03) :301-313
[32]   Identification of species (meat and blood samples) using nested-PCR analysis of mitochondrial DNA [J].
Unajak, Sasimanas ;
Meesawat, Piyachat ;
Anyamaneeratch, Komsan ;
Anuwareepong, Duangtip ;
Srikulnath, Kornsorn ;
Choowongkomon, Kiattawee .
AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (29) :5670-5676
[33]   Phylogenetic study and identification of human pathogenic Vibrio species based on partial hsp60 gene sequences [J].
Kwok, AYC ;
Wilson, JT ;
Coulthart, M ;
Ng, LK ;
Mutharia, L ;
Chow, AW .
CANADIAN JOURNAL OF MICROBIOLOGY, 2002, 48 (10) :903-910
[34]   Identification of guitarfish species Rhinobatos percellens, R. horkelli, and Zapteryx brevirostris (Chondrichthyes) using mitochondrial genes and RFLP technique [J].
Mariguela, T. C. ;
De-Franco, B. ;
Almeida, T. V. V. ;
Mendonca, F. F. ;
Gadig, O. B. F. ;
Foresti, F. ;
Oliveira, C. .
CONSERVATION GENETICS RESOURCES, 2009, 1 (01) :393-396
[35]   Identification of guitarfish species Rhinobatos percellens, R. horkelli, and Zapteryx brevirostris (Chondrichthyes) using mitochondrial genes and RFLP technique [J].
T. C. Mariguela ;
B. De-Franco ;
T. V. V. Almeida ;
F. F. Mendonça ;
O. B. F. Gadig ;
F. Foresti ;
C. Oliveira .
Conservation Genetics Resources, 2009, 1 :393-396
[36]   Assigning confidence to sequence comparisons for species identification: A detailed comparison of the cytochrome b and cytochrome oxidase subunit I mitochondrial genes [J].
Tobe, Shanan S. ;
Kitchener, Andrew C. ;
Linacre, Adrian .
FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES, 2011, 3 (01) :E246-E247
[37]   Molecular identification key based on PCR/RFLP for three polychaete sibling species of the genus Marenzelleria, and the species' current distribution in the Baltic Sea [J].
Blank, M. ;
Laine, A. O. ;
Juerss, K. ;
Bastrop, R. .
HELGOLAND MARINE RESEARCH, 2008, 62 (02) :129-141
[38]   Analysis of the pharyngeal structure of the genus Oreochromis for species identification through geometric morphometrics in the Aguamilpa reservoir, Nayarit, Mexico [J].
Cuevas-Rodriguez, Breidy L. ;
Rubio-Gomez, Wally K. ;
Granados-Amores, Jasmin ;
Duenas-Romero, Jesus J. Due ;
Valdez-Gonzalez, Francisco J. ;
Sandoval-Castro, Eduardo ;
Gonzalez-Huerta, Claudia A. ;
Gonzalez-Hermoso, Juan P. ;
Zavala-Leal, Oscar I. .
ZOOLOGISCHER ANZEIGER, 2024, 313 :183-190
[39]   Differentiation of fish species by PCR-based DNA analysis of nuclear genes [J].
Rehbein, Hartmut .
EUROPEAN FOOD RESEARCH AND TECHNOLOGY, 2013, 236 (06) :979-990
[40]   Identification of alfonsino and related fish species belonging to the genus Beryx with mitochondrial 16S rRNA gene and its application on their pelagic eggs [J].
Akimoto, S ;
Kinoshita, S ;
Sezaki, K ;
Mitani, I ;
Watabe, S .
FISHERIES SCIENCE, 2002, 68 (06) :1242-1249