Unraveling condition specific gene transcriptional regulatory networks in Saccharomyces cerevisiae

被引:0
|
作者
Hyunsoo Kim
William Hu
Yuval Kluger
机构
[1] NYU School of Medicine,Department of Cell Biology
[2] Skirball Institute of Biomolecular Medicine,undefined
来源
BMC Bioinformatics | / 7卷
关键词
Transcriptional Regulatory Network; Input Gene; Link Model; Star Model; Amino Acid Starvation;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] A systems biology approach to the identification and analysis of transcriptional regulatory networks in osteocytes
    Angela K Dean
    Stephen E Harris
    Ivo Kalajzic
    Jianhua Ruan
    BMC Bioinformatics, 10
  • [22] An ensemble learning approach to reverse-engineering transcriptional regulatory networks from time-series gene expression data
    Jianhua Ruan
    Youping Deng
    Edward J Perkins
    Weixiong Zhang
    BMC Genomics, 10
  • [23] Inference of transcriptional regulatory networks using CAGE transcriptome dataset of Mus musculus
    Taki, Kohei
    Takenaka, Yoichi
    Matsuda, Hideo
    WORLD CONGRESS ON MEDICAL PHYSICS AND BIOMEDICAL ENGINEERING 2006, VOL 14, PTS 1-6, 2007, 14 : 187 - 190
  • [24] Reconstruction of Transcriptional Regulatory Networks by Stability-Based Network Component Analysis
    Chen, Xi
    Xuan, Jianhua
    Wang, Chen
    Shajahan, Ayesha N.
    Riggins, Rebecca B.
    Clarke, Robert
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2013, 10 (06) : 1347 - 1358
  • [25] Human transcriptional gene regulatory network compiled from 14 data resources
    Muley, Vijaykumar Yogesh
    Koenig, Rainer
    BIOCHIMIE, 2022, 193 : 115 - 125
  • [26] Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual information
    Weijun Luo
    Kurt D Hankenson
    Peter J Woolf
    BMC Bioinformatics, 9
  • [27] Collection and Curation of Transcriptional Regulatory Interactions in Aspergillus nidulans and Neurospora crassa Reveal Structural and Evolutionary Features of the Regulatory Networks
    Hu, Yibo
    Qin, Yuqi
    Liu, Guodong
    FRONTIERS IN MICROBIOLOGY, 2018, 9
  • [28] SAGA: A hybrid search algorithm for Bayesian Network structure learning of transcriptional regulatory networks
    Adabor, Emmanuel S.
    Acquaah-Mensah, George K.
    Oduro, Francis T.
    JOURNAL OF BIOMEDICAL INFORMATICS, 2015, 53 : 27 - 35
  • [29] CoryneRegNet 4.0 – A reference database for corynebacterial gene regulatory networks
    Jan Baumbach
    BMC Bioinformatics, 8
  • [30] In vivo topography of RAP1p-DNA complex at Saccharomyces cerevisiae TEF2 UASRPG during transcriptional regulation
    De Sanctis, V
    La Terra, S
    Bianchi, A
    Shore, D
    Burderi, L
    Di Mauro, E
    Negri, R
    JOURNAL OF MOLECULAR BIOLOGY, 2002, 318 (02) : 333 - 349