Complete mitochondrial genome sequence of Catla catla and its phylogenetic consideration

被引：0
作者：
Dillip Bej
L. Sahoo
Sofia P. Das
Subrat Swain
P. Jayasankar
P. C. Das
P. Routray
S. K. Swain
J. K. Jena
P. Das
机构：
[1] Central Institute of Freshwater Aquaculture,Fish Genetics and Biotechnology Division
[2] National Bureau of Fish Genetic Resources,undefined
[3] Central Institute of Freshwater Aquaculture,undefined
来源：
Molecular Biology Reports | 2012年 / 39卷
关键词：
Mitochondrial genome; Cyprinidae;
D O I：
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中图分类号：
学科分类号：
摘要：
Complete nucleotide sequence of mitochondrial genome (mitogenome) of the Catla catla (Ostariophysi: Cypriniformes: Cyprinidae) was determined in the present study. Its length is 16,594 bp and contains 13 protein coding genes, 22 transfer RNAs, two ribosomal RNAs and one non-coding control region. Most of the genes were encoded on the H-strand, while the ND6 and eight tRNA (Gln, Ala, Asn, Cys, Tyr, Ser (UCN), Glu and Pro) genes were encoded on the L-strand. The reading frames of two pair of genes overlapped: ATPase 8 with 6 and ND4L with ND4 by seven nucleotides each. The main non-coding region was 929 bp, with three conserved sequence blocks (CSB-I, CSB-II, and CSB-III) and an unusual simple sequence repeat, (TA)7. Phylogenetic analyses based on complete mitochondrial genome sequences were in favor of the traditional taxonomy of family Cyprinidae. In conclusion present mitogenome of Catla catla adds more information to our understanding of diversity and evolution of mitogenome in fishes.
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页码：10347 / 10354
页数：7
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