Construction and validation of a novel prognostic model of neutrophil‑related genes signature of lung adenocarcinoma

被引:0
|
作者
Qianjun Zhu
Yanfei Chai
Longyu Jin
Yuchao Ma
Hongwei Lu
Yingji Chen
Wei Feng
机构
[1] Central South University,Department of Cardiothoracic Surgery, Third Xiangya Hospital
[2] Central South University,Center for Experimental Medicine, Third Xiangya Hospital
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Lung adenocarcinoma (LUAD) remains an incurable disease with a poor prognosis. This study aimed to explore neutrophil‑related genes (NRGs) and develop a prognostic signature for predicting the prognosis of LUAD. NRGs were obtained by intersecting modular genes identified by weighted gene co-expression network analysis (WGCNA) using bulk RNA-seq data and the marker genes of neutrophils identified from single-cell RNA-sequencing(scRNA-seq) data. Univariate Cox regression, least absolute shrinkage and selection operator (LASSO), and multivariate Cox analyses were run to construct a prognostic signature, follow by delineation of risk groups, and external validation. Analyses of ESTIMAT, immune function, Tumor Immune Dysfunction and Exclusion (TIDE) scores, Immune cell Proportion Score (IPS), and immune checkpoint genes between high- and low-risk groups were performed, and then analyses of drug sensitivity to screen for sensitive anticancer drugs in high-risk groups. A total of 45 candidate NRGs were identified, of which PLTP, EREG, CD68, CD69, PLAUR, and CYP27A1 were considered to be significantly associated with prognosis in LUAD and were used to construct a prognostic signature. Correlation analysis showed significant differences in the immune landscape between high- and low-risk groups. In addition, our prognostic signature was important for predicting drug sensitivity in the high-risk group. Our study screened for NRGs in LUAD and constructed a novel and effective signature, revealing the immune landscape and providing more appropriate guidance protocols in LUAD treatment.
引用
收藏
相关论文
共 50 条
  • [31] Identification of New Prognostic Genes and Construction of a Prognostic Model for Lung Adenocarcinoma
    Chen, Xueping
    Yu, Liqun
    Zhang, Honglei
    Jin, Hua
    DIAGNOSTICS, 2023, 13 (11)
  • [32] Construction of a prognostic model for lung adenocarcinoma based on membrane-tension-related genes
    Zhu, Peiquan
    Teng, Zhangyu
    Yang, Wenxing
    Zhang, Dengguo
    Wang, Biao
    Yang, Ze
    Wang, Kaiqiang
    Pu, Jiangtao
    JOURNAL OF THORACIC DISEASE, 2023, 15 (04) : 2098 - +
  • [33] Construction and validation of a novel prognostic model with palmitoylation-related genes for glioblastoma
    Qin, Guowen
    Pang, Gang
    Wu, Shuaishuai
    Bi, Shuiqing
    Lan, Shengyong
    Tang, Xiuwen
    Hu, Beiquan
    Zhou, Junlin
    Shi, Fengning
    Qin, Chengjian
    TRANSLATIONAL CANCER RESEARCH, 2024, 13 (11)
  • [34] Systematic construction and validation of an immune prognostic model for lung adenocarcinoma
    Luo, Chenghan
    Lei, Mengyuan
    Zhang, Yixia
    Zhang, Qian
    Li, Lifeng
    Lian, Jingyao
    Liu, Shasha
    Wang, Liping
    Pi, Guofu
    Zhang, Yi
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2020, 24 (02) : 1233 - 1244
  • [35] Development and validation of a novel epigenetic-related prognostic signature and candidate drugs for patients with lung adenocarcinoma
    Wang, Zhihao
    Embaye, Kidane Siele
    Yang, Qing
    Qin, Lingzhi
    Zhang, Chao
    Liu, Liwei
    Zhan, Xiaoqian
    Zhang, Fengdi
    Wang, Xi
    Qin, Shenghui
    AGING-US, 2021, 13 (14): : 18701 - 18717
  • [36] Construction and validation of a hypoxia-related risk signature identified EXO1 as a prognostic biomarker based on 12 genes in lung adenocarcinoma
    Chen, Qirui
    Chen, Shuo
    Wang, Jing
    Zhao, Yan
    Ye, Xin
    Fu, Yili
    Liu, Yi
    AGING-US, 2023, 15 (06): : 2293 - 2307
  • [37] Identification and Validation of a Novel Necroptosis-Related Long Noncoding RNA Prognostic Signature for Lung Adenocarcinoma
    Zeng, Cheng
    Yu, Huayi
    Liu, Xiuling
    Liu, Qian
    Jin, Jianhua
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [38] Identification of a novel prognostic signature based on vitamin metabolism clustering-related genes in lung adenocarcinoma
    Chen, Yu
    Jiang, Yupeng
    Li, Xionghui
    Huang, Hong
    Zhou, Yangying
    Zhang, Chenzi
    Wang, Shunjun
    Bohnenberger, Hanibal
    Gao, Yawen
    TRANSLATIONAL LUNG CANCER RESEARCH, 2024, 13 (05) : 1084 - 1100
  • [39] A novel iTreg-related signature for prognostic prediction in lung adenocarcinoma
    Zhang, Jian
    Li, Yan
    Yang, Yue
    Huang, Jian
    Sun, Yue
    Zhang, Xi
    Kong, Xianglong
    CANCER SCIENCE, 2024, 115 (01) : 109 - 124
  • [40] Identification and Validation of Immune-Related LncRNA Prognostic Signature for Lung Adenocarcinoma
    Wu, Guomin
    Wang, Qihao
    Zhu, Ting
    Fu, Linhai
    Li, Zhupeng
    Wu, Yuanlin
    Zhang, Chu
    FRONTIERS IN GENETICS, 2021, 12