Density functional theory study of 1:1 glycine-water complexes in the gas phase and in solution

被引:0
|
作者
HongWei Ke
Li Rao
Xin Xu
YiJing Yan
机构
[1] Hong Kong University of Science and Technology,Department of Chemistry
[2] Xiamen University,State Key Laboratory for Physical Chemistry of Solid Surfaces and Department of Chemistry
来源
Science China Chemistry | 2010年 / 53卷
关键词
glycine; solvent effect; hydrogen bond;
D O I
暂无
中图分类号
学科分类号
摘要
We present a systematic study of 1:1 glycine-water complexes involving all possible glycine conformers. The complex geometries are fully optimized for the first time both in the gas phase and in solution using three DFT methods (B3LYP, PBE1PBE, X3LYP) and the MP2 method. We calculate the G3 energies and use them as the reference data to gauge hydrogen bond strength in the gas phase. The solvent effects are treated via the integral equation formalism-polarizable continuum model (IEF-PCM). Altogether, we locate fifty-two unique nonionized (N) structures and six zwitterionic (Z) structures in the gas phase, and fifty-five N structures and thirteen Z structures in solution. Both correlation and solvation are shown to be important in geometry determination. We found that in the gas phase, a water molecule binds more strongly to the carboxylic acid group of glycine than to its amine group, whereas in solution phase the reverse is true. The most stable Z structure is isoenergetic with the most stable N structure.
引用
收藏
页码:383 / 395
页数:12
相关论文
共 50 条
  • [31] Mechanism of solvothermal conversion of xylose to furfural in rich-methanol solution: A study based on density functional theory
    Cheng, Xiaoxue
    Jiang, Ding
    Hu, Xun
    Barati, Bahram
    Hu, Yamin
    Qian, Lili
    He, Zhixia
    Wang, Shuang
    Li, Hongping
    JOURNAL OF ANALYTICAL AND APPLIED PYROLYSIS, 2021, 154
  • [32] Density functional theory study of red-shifted hydrogen bonds of 4-pyridinemethanol with water
    Li Quan
    Cai Jing
    Chen Jun-Rong
    Zhao Ka-Qing
    CHINESE JOURNAL OF CHEMISTRY, 2008, 26 (02) : 255 - 259
  • [33] Time-dependent Density Functional Theory Study on the Hydrogen-bonded Dimers Formed by Gauche-1PA and Trans-1PA
    Song, Peng
    Zhu, Yong-Hua
    Li, Yong-Qing
    Ding, Yong
    Ma, Feng-Cai
    JOURNAL OF THE CHINESE CHEMICAL SOCIETY, 2012, 59 (04) : 494 - 499
  • [34] Thermodynamic study on the protonation of glycine in different (water+1-butyl-3-methylimidazolium tetrafluoroborate) mixed solvents and ionic strengths
    Majlesi, Kavosh
    De Stefano, Concetta
    Lando, Gabriele
    Sammartano, Silvio
    JOURNAL OF CHEMICAL THERMODYNAMICS, 2013, 67 : 163 - 169
  • [35] Crystal structure, Hirshfeld surface analysis and density functional theory study of 1-nonyl-3-phenylquinoxaim-2-one
    Abad, Nadeem
    Chkirate, Karim
    Al-Ostoot, Fares Hezam
    Van Meervelt, Luc
    Lahmidi, Sanae
    Ferfra, Souad
    Ramli, Youssef
    Essassi, El Mokhtar
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2021, 77 : 1037 - +
  • [36] Gas-phase basicities of polyfunctional molecules. part 1: Theory and methods
    Bouchoux, Guy
    MASS SPECTROMETRY REVIEWS, 2007, 26 (06) : 775 - 835
  • [37] Theoretical study of optical activity of 1:1 hydrogen bond complexes of water with S-warfarin
    Dadsetani, Mehrdad
    Abdolmaleki, Ahmad
    Zabardasti, Abedin
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2016, 168 : 180 - 189
  • [38] Time-dependent Density Functional Theory Study on the Electronically Excited States of N-Methylformamide in Aqueous Solution
    Yin Shu-Hui
    Ma Chao
    He Xiang-Yi
    Guo Ming-Xing
    Xu Xue-Song
    Song Zhe
    Han Yi-Xuan
    CHINESE JOURNAL OF STRUCTURAL CHEMISTRY, 2012, 31 (07) : 925 - 932
  • [39] Time-dependent Density Functional Theory Study on the Electronically Excited States of N-Methylformamide in Aqueous Solution
    尹淑慧
    马超
    何香怡
    郭明星
    许雪松
    宋哲
    韩易轩
    结构化学, 2012, 31 (07) : 925 - 932
  • [40] Computational study of (CH3 - CN)n (n=1-5) oligomers using Density Functional Theory method
    Kharat, Bhagwat
    Deshmukh, Vinayak
    Chaudhari, Ajay
    JOURNAL OF MOLECULAR LIQUIDS, 2013, 177 : 172 - 181