Transcriptome profiling and co-expression network analysis of lncRNAs and mRNAs in colorectal cancer by RNA sequencing

被引:0
|
作者
Mingjie Li
Dandan Guo
Xijun Chen
Xinxin Lu
Xiaoli Huang
Yan’an Wu
机构
[1] Xiang’an Hospital of Xiamen University,Department of Clinical Laboratory
[2] School of Medicine,Shengli Clinical Medical College of Fujian Medical University
[3] Xiamen University,undefined
[4] Fujian Medical University,undefined
来源
BMC Cancer | / 22卷
关键词
Colorectal cancer; lncRNA; RNA-sequencing; Co-expression;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Revolutionizing prognostic predictions in colorectal cancer: Macrophage-driven transcriptional insights from single-cell RNA sequencing and gene co-expression network analysis
    Feng, Yang
    Cheng, Zhuo
    Gao, Jingyuan
    Huang, Tao
    Wang, Jun
    Tang, Qian
    Pu, Ke
    Liu, Chang
    ONCOLOGY LETTERS, 2024, 28 (06)
  • [22] Identification of novel methylated targets in colorectal cancer by microarray analysis and construction of co-expression network
    Li, Dongsheng
    Guo, Jialin
    Wang, Song
    Zhu, Liangchen
    Shen, Zugang
    ONCOLOGY LETTERS, 2017, 14 (03) : 2643 - 2648
  • [23] RNA sequencing and bioinformatics analysis of the long noncoding RNA-mRNA network in colorectal cancer
    Zhang, Zheying
    Jia, Huijie
    Gu, Tengteng
    Hu, Qing
    Yu, Jian
    Zang, Dan
    Song, Na
    Wang, Haijun
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2018, 119 (12) : 9957 - 9966
  • [24] Co-expression Network Analysis Identified Key Proteins in Association With Hepatic Metastatic Colorectal Cancer
    Yang, Wang
    Shi, Jian
    Zhou, Yan
    Liu, Tongjun
    Li, Jiannan
    Hong, Feng
    Zhang, Kai
    Liu, Ning
    PROTEOMICS CLINICAL APPLICATIONS, 2019, 13 (06)
  • [25] Identification of key modules and micro RNAs associated with colorectal cancer via a weighted gene co-expression network analysis and competing endogenous RNA network analysis
    Li, Lifang
    Ruan, Jingxiong
    Ma, Yanfen
    Xu, Xin
    Qin, Hao
    Tian, Xudong
    Hu, Jian
    JOURNAL OF GASTROINTESTINAL ONCOLOGY, 2023, 14 (03) : 1320 - 1330
  • [26] Long noncoding RNA and mRNA profiling in cetuximab-resistant colorectal cancer cells by RNA sequencing analysis
    Jing, Changwen
    Ma, Rong
    Cao, Haixia
    Wang, Zhuo
    Liu, Siwen
    Chen, Dan
    Wu, Yang
    Zhang, Junying
    Wu, Jianzhong
    CANCER MEDICINE, 2019, 8 (04): : 1641 - 1651
  • [27] Transcriptome Profiling of HCT-116 Colorectal Cancer Cells with RNA Sequencing Reveals Novel Targets for Polyphenol Nano Curcumin
    Azeez, Hewa Jalal
    Neri, Francesco
    Feizi, Mohammad Ali Hosseinpour
    Babaei, Esmaeil
    MOLECULES, 2022, 27 (11):
  • [28] Identification of genes in ulcerative colitis associated colorectal cancer based on centrality analysis of co-expression network
    Zhu, J.
    Li, C.
    Ji, W.
    NEOPLASMA, 2015, 62 (05) : 756 - 764
  • [29] Differentially expressed lncRNAs and mRNAs identified by NGS analysis in colorectal cancer patients
    Li, Meng
    Zhao, Lian-mei
    Li, Suo-lin
    Li, Jing
    Gao, Bo
    Wang, Fei-fei
    Wang, Sheng-pu
    Hu, Xu-hua
    Cao, Jian
    Wang, Gui-ying
    CANCER MEDICINE, 2018, 7 (09): : 4650 - 4664
  • [30] Identification and Co-expression Analysis of Differentially Expressed LncRNAs and mRNAs Regulate Intramuscular Fat Deposition in Yaks at Two Developmental Stages
    Gao, Zhanhong
    Su, Quyangangmao
    Raza, Sayed Haidar Abbas
    Piras, Cristian
    Binmowyna, Mona N.
    Al-Zahrani, Majid
    Mavromatis, Charalampos
    Makhlof, Raafat T. M.
    Senna, Mustafa M.
    Gui, Linsheng
    BIOCHEMICAL GENETICS, 2025,