Genome-wide analysis of fluoride exporter genes in plants

被引:0
|
作者
Samridhi Agarwal
Preetom Regon
Mehzabin Rehman
Bhaben Tanti
Sanjib Kumar Panda
机构
[1] Central University of Rajasthan,Department of Biochemistry
[2] Assam University,Department of Life Science and Bioinformatics
[3] Gauhati University,Department of Botany
来源
3 Biotech | 2021年 / 11卷
关键词
Fluoride toxicity; FEX; Gene expression; Plants;
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学科分类号
摘要
Fluoride exporter genes (FEX) are known for the expulsion of cytoplasmic fluoride, thus preventing fluoride toxicity in plants. In this study, 31 FEX genes were identified across 19 plant species. Camphor Resistance (CrcB) domain was found to be present in all the identified FEX genes in plants. FEX genes were sequentially very conserved among the plants and are located mostly in chloroplast and mitochondria. The tertiary structure (3D) of AtFEX1 suggests that FEX genes of plants possess pore I and pore II, necessary for fluoride export. The TTFSGWNQ and GCLSTVSTF motifs were found to be well conserved in pore I and pore II. Phenylalanine (Phe/F) was also present in both the motifs, necessary for fluoride ions recognition and export. Cis-acting analysis in promoter sequences of plant FEX revealed several elements associated with various functions such as phytohormone signaling, integrating biotic and abiotic stress responses in plants. Prolong fluoride exposure causes necrosis in young leaves in Vigna radiata. Expression of VrFEX1 and VrFEX2 were highly induced under exogenous fluoride, thus suggesting a possible role in fluoride detoxification.
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