Hydrogen-bond interactions in hydrated 6-selenoguanine tautomers: a theoretical study

被引:0
作者
M. Karthika
L. Senthilkumar
R. Kanakaraju
机构
[1] NGM College,Department of Physics
[2] Bharathiar University,Department of Physics
来源
Structural Chemistry | 2014年 / 25卷
关键词
Tautomer; Selenium; DFT; Hydration; AIM; NBO;
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摘要
A comprehensive theoretical investigation has been performed to study the six most stable complexes of isolated, mono, and hexahydrated 6-selenoguanine tautomers. The ground state geometries are studied at the density-functional theory and Møller–Plesset Perturbation theory implementing the 6-311++G (2d, 2p) basis set. The intermolecular distances between the water molecule and the acceptor atom of 6-selenoguanine is about 0.6 Å longer for hydrogen bonds involving selenium atom. The relative Gibbs free energy of the 6-selenoguanine tautomers favors the selenone tautomer. The majority of the stable monohydrated complexes are the one in which the oxygen atom of water accepts the acidic N7-H proton while donating a proton to the carbonyl selenium atom of 6-selenoguanine; the interaction toward N7-H being stronger than that with the selenium site. The amino group planarity has been found to be increased in the hydrated complexes. The examination of molecular orbital reveals a moderate band gap between the donor and acceptor atoms of isolated and hydrated complexes. An excellent linear correlation is found to exist between electron density and laplacian of electron density with hydrogen-bond length through atoms in molecule analysis. The natural bond orbital analysis shows a maximum charge transfer of 0.060e for selenium acceptors and around 0.025e for selenium donors.
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页码:197 / 213
页数:16
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共 137 条
[11]  
Guziec LJ(2002)undefined J Phys Chem A 106 4661-4668
[12]  
Guziec FS(1994)undefined J Phys Chem 98 4973-4981
[13]  
Taurog A(2008)undefined Nucleic Acids Res 36 7009-7018
[14]  
Dorris ML(1963)undefined J Med Chem 6 36-39
[15]  
Hu W-X(1994)undefined J Mol Struct (THEOCHEM) 311 37-44
[16]  
Guziec FS(1998)undefined J Phys Chem A 102 6161-6166
[17]  
Alkorta I(2010)undefined Bull Korean Chem Soc 31 3013-3016
[18]  
Elguero J(2012)undefined J Comput Chem 33 1587-1593
[19]  
Grabowski SJ(1992)undefined Int J Quantum Chem 42 1499-1514
[20]  
Grabowski SJ(2004)undefined J Mol Struct (THEOCHEM) 679 195-205