Understanding the Diversity and Roles of the Ruminal Microbiome

被引:26
作者
Keum, Gi Beom [1 ]
Pandey, Sriniwas [1 ]
Kim, Eun Sol [1 ]
Doo, Hyunok [1 ]
Kwak, Jinok [1 ]
Ryu, Sumin [1 ]
Choi, Yejin [1 ]
Kang, Juyoun [1 ]
Kim, Sheena [1 ]
Kim, Hyeun Bum [1 ]
机构
[1] Dankook Univ, Dept Anim Biotechnol, Cheonan 31116, South Korea
关键词
Animal; Microbiome; Ruminant; RUMEN BACTERIAL COMMUNITY; DAIRY CALVES; GASTROINTESTINAL-TRACT; FIBER DEGRADATION; GUT MICROBIOTA; ACIDOSIS SARA; BEEF-CATTLE; FERMENTATION; BIRTH; ECOLOGY;
D O I
10.1007/s12275-024-00121-4
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The importance of ruminal microbiota in ruminants is emphasized, not only as a special symbiotic relationship with ruminants but also as an interactive and dynamic ecosystem established by the metabolites of various rumen microorganisms. Rumen microbial community is essential for life maintenance and production as they help decompose and utilize fiber that is difficult to digest, supplying about 70% of the energy needed by the host and 60-85% of the amino acids that reach the small intestine. Bacteria are the most abundant in the rumen, but protozoa, which are relatively large, account for 40-50% of the total microorganisms. However, the composition of these ruminal microbiota is not conserved or constant throughout life and is greatly influenced by the host. It is known that the initial colonization of calves immediately after birth is mainly influenced by the mother, and later changes depending on various factors such as diet, age, gender and breed. The initial rumen microbial community contains aerobic and facultative anaerobic bacteria due to the presence of oxygen, but as age increases, a hypoxic environment is created inside the rumen, and anaerobic bacteria become dominant in the rumen microbial community. As calves grow, taxonomic diversity increases, especially as they begin to consume solid food. Understanding the factors affecting the rumen microbial community and their effects and changes can lead to the early development and stabilization of the microbial community through the control of rumen microorganisms, and is expected to ultimately help improve host productivity and efficiency.
引用
收藏
页码:217 / 230
页数:14
相关论文
共 151 条
[61]  
Klieve A.V., 1996, P AUST SOC ANIM PROD, V21, P92
[62]   Fibrolytic Rumen Bacteria: Their Ecology and Functions [J].
Koike, Satoshi ;
Kobayashi, Yasuo .
ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 2009, 22 (01) :131-138
[63]   Board-invited review: Rumen microbiology: Leading the way in microbial ecology [J].
Krause, D. O. ;
Nagaraja, T. G. ;
Wright, A. D. G. ;
Callaway, T. R. .
JOURNAL OF ANIMAL SCIENCE, 2013, 91 (01) :331-341
[64]   Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics [J].
Krause, DO ;
Denman, SE ;
Mackie, RI ;
Morrison, M ;
Rae, AL ;
Attwood, GT ;
McSweeney, CS .
FEMS MICROBIOLOGY REVIEWS, 2003, 27 (05) :663-693
[65]   Methanobrevibacter boviskoreani sp nov., isolated from the rumen of Korean native cattle [J].
Lee, Jong-Hwan ;
Kumar, Sanjay ;
Lee, Geun-Hye ;
Chang, Dong-Ho ;
Rhee, Moon-Soo ;
Yoon, Min-Ho ;
Kim, Byoung-Chan .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :4196-4201
[66]   Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV) [J].
Lefkowitz, Elliot J. ;
Dempsey, Donald M. ;
Hendrickson, Robert Curtis ;
Orton, Richard J. ;
Siddell, Stuart G. ;
Smith, Donald B. .
NUCLEIC ACIDS RESEARCH, 2018, 46 (D1) :D708-D717
[67]   Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle [J].
Li, Fuyong ;
Hitch, Thomas C. A. ;
Chen, Yanhong ;
Creevey, Christopher J. ;
Guan, Le Luo .
MICROBIOME, 2019, 7 (1)
[68]   Metatranscriptomic Profiling Reveals Linkages between the Active Rumen Microbiome and Feed Efficiency in Beef Cattle [J].
Li, Fuyong ;
Guan, Le Luo .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2017, 83 (09)
[69]   Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools [J].
Li, Robert W. ;
Connor, Erin E. ;
Li, Congjun ;
Baldwin, Ransom L. ;
Sparks, Michael E. .
ENVIRONMENTAL MICROBIOLOGY, 2012, 14 (01) :129-139
[70]   Castration alters the cecal microbiota and inhibits growth in Holstein cattle [J].
Li, Zemin ;
Shi, Jinping ;
Lei, Yu ;
Wu, Jianping ;
Zhang, Rui ;
Zhang, Xiao ;
Jia, Li ;
Wang, Ying ;
Ma, Yue ;
He, Pengjia ;
Ma, Yannan ;
Cheng, Qiang ;
Zhang, Zhao ;
Zhang, Ke ;
Lei, Zhaomin .
JOURNAL OF ANIMAL SCIENCE, 2022, 100 (12)