Toll-Like Receptor Gene Polymorphisms in a Population-Based Study of HIV and Tuberculosis Patients from Eastern Europe and Central Asia

被引:0
作者
Salamaikina, S. A. [1 ,2 ]
Korchagin, V. I. [1 ]
Mironov, K. O. [1 ]
Kulabukhova, E. I. [1 ,3 ]
Zimina, V. N. [4 ]
Kravtchenko, A. V. [1 ]
机构
[1] Cent Res Inst Epidemiol Fed Serv Surveillance Cons, Moscow 111123, Russia
[2] Moscow Inst Phys & Technol, Dolgoprudnyi 141701, Russia
[3] Peoples Friendship Univ Russia RUDN Univ, Moscow 117198, Russia
[4] Kemerovo State Med Univ, Kemerovo 650056, Russia
关键词
immune response genes; Toll-like receptors; single nucleotide polymorphism; human populations; HIV; tuberculosis; DEMOGRAPHIC HISTORY; SUSCEPTIBILITY; ASSOCIATION; HAPLOTYPES; REVEALS;
D O I
10.1134/S1022795424040124
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Genetic diversity of human populations is determined by polymorphic variants of immune response genes and can be linked to the variation in responses to infectious agents. This study compared allele and genotype frequencies of polymorphic variants of the TLR1, TLR2, TLR4, TLR6, and TLR8 genes between samples from Eastern Europe and Central Asia. We included 680 unrelated individuals from Eastern Slavic (n = 308), Armenian (n = 137), Tajik (n = 138), and Kyrgyz (n = 97) samples of patients with confirmed diagnoses of HIV and tuberculosis. The international 1000 Genomes Project data-samples of Caucasians (EUR) and countries of eastern (EAS) and southern (SAS) Asia-were used for comparison. Despite the lack of genetic diversity and population differences in allele frequencies of the analyzed genes, the samples differed in a number of loci both from each other and from EAS and SAS samples.
引用
收藏
页码:516 / 523
页数:8
相关论文
共 41 条
[1]   A global reference for human genetic variation [J].
Altshuler, David M. ;
Durbin, Richard M. ;
Abecasis, Goncalo R. ;
Bentley, David R. ;
Chakravarti, Aravinda ;
Clark, Andrew G. ;
Donnelly, Peter ;
Eichler, Evan E. ;
Flicek, Paul ;
Gabriel, Stacey B. ;
Gibbs, Richard A. ;
Green, Eric D. ;
Hurles, Matthew E. ;
Knoppers, Bartha M. ;
Korbel, Jan O. ;
Lander, Eric S. ;
Lee, Charles ;
Lehrach, Hans ;
Mardis, Elaine R. ;
Marth, Gabor T. ;
McVean, Gil A. ;
Nickerson, Deborah A. ;
Wang, Jun ;
Wilson, Richard K. ;
Boerwinkle, Eric ;
Doddapaneni, Harsha ;
Han, Yi ;
Korchina, Viktoriya ;
Kovar, Christie ;
Lee, Sandra ;
Muzny, Donna ;
Reid, Jeffrey G. ;
Zhu, Yiming ;
Chang, Yuqi ;
Feng, Qiang ;
Fang, Xiaodong ;
Guo, Xiaosen ;
Jian, Min ;
Jiang, Hui ;
Jin, Xin ;
Lan, Tianming ;
Li, Guoqing ;
Li, Jingxiang ;
Li, Yingrui ;
Liu, Shengmao ;
Liu, Xiao ;
Lu, Yao ;
Ma, Xuedi ;
Tang, Meifang ;
Wang, Bo .
NATURE, 2015, 526 (7571) :68-+
[2]  
Dalgic N, 2011, DIS MARKERS, V31, P33, DOI [10.1155/2011/545972, 10.3233/DMA-2011-0800]
[3]   Genetic Association and Expression Studies Indicate a Role of Toll-Like Receptor 8 in Pulmonary Tuberculosis [J].
Davila, Sonia ;
Hibberd, Martin L. ;
Dass, Ranjeeta Hari ;
Wong, Hazel E. E. ;
Sahiratmadja, Edhyana ;
Bonnard, Carine ;
Alisjahbana, Bachti ;
Szeszko, Jeffrey S. ;
Balabanova, Yanina ;
Drobniewski, Francis ;
van Crevel, Reinout ;
van de Vosse, Esther ;
Nejentsev, Sergey ;
Ottenhoff, Tom H. M. ;
Seielstad, Mark .
PLOS GENETICS, 2008, 4 (10)
[4]   The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection [J].
El-Bendary, M. ;
Neamatallah, M. ;
Elalfy, H. ;
Besheer, T. ;
Elkholi, A. ;
El-Diasty, M. ;
Elsareef, M. ;
Zahran, M. ;
El-Aarag, B. ;
Gomaa, A. ;
Elhammady, D. ;
El-Setouhy, M. ;
Hegazy, A. ;
Esmat, G. .
BRITISH JOURNAL OF BIOMEDICAL SCIENCE, 2018, 75 (04) :175-181
[5]   The toll-like receptor 4 Asp299Gly variant and tuberculosis susceptibility in HIV-infected patients in Tanzania [J].
Ferwerda, Bart ;
Kibiki, Gibson S. ;
Netea, Mihai G. ;
Dolmans, Wil M. V. ;
van der Ven, Andre J. .
AIDS, 2007, 21 (10) :1375-1377
[6]   Association between the TLR2 Arg753Gln polymorphism and the risk of sepsis: a meta-analysis [J].
Gao, Jun-wei ;
Zhang, An-qiang ;
Wang, Xiao ;
Li, Zhong-yun ;
Yang, Jian-hua ;
Zeng, Ling ;
Gu, Wei ;
Jiang, Jian-xin .
CRITICAL CARE, 2015, 19
[7]  
Graffelman J, 2015, J STAT SOFTW, V64, P1, DOI 10.18637/jss.v064.i03
[8]   Genetic continuity of Indo-Iranian speakers since the Iron Age in southern Central Asia [J].
Guarino-Vignon, Perle ;
Marchi, Nina ;
Bendezu-Sarmiento, Julio ;
Heyer, Evelyne ;
Bon, Celine .
SCIENTIFIC REPORTS, 2022, 12 (01)
[9]   Influence of Genetic Polymorphism Towards Pulmonary Tuberculosis Susceptibility [J].
Harishankar, Murugesan ;
Selvaraj, Paramasivam ;
Bethunaickan, Ramalingam .
FRONTIERS IN MEDICINE, 2018, 5 :1-1
[10]   Genetic diversity and the emergence of ethnic groups in Central Asia [J].
Heyer, Evelyne ;
Balaresque, Patricia ;
Jobling, Mark A. ;
Quintana-Murci, Lluis ;
Chaix, Raphaelle ;
Segurel, Laure ;
Aldashev, Almaz ;
Hegay, Tanya .
BMC GENETICS, 2009, 10 :49