An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana

[1] Initiative TAG(2000)Analysis of the genome sequence of the flowering plant Nature 408 796-815

[2] Alonso JM(2006)Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis Nat Rev Genet 7 524-536

[3] Ecker JR(2003)An Plant Mol Biol 53 247-259

[4] Rosso MG(2002) T-DNA mutagenised population (GABI-Kat) for flanking sequence tag based reverse genetics Plant J 32 233-242

[5] Li Y(2006)Distribution of 1000 sequenced T-DNA tags in the Arabidopsis genome Genomics 87 645-652

[6] Strizhov N(2007)Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions Plant J 51 779-791

[7] Reiss B(2003)Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions BioTechniques 35 1164-1168

[8] Dekker K(1990)High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines J Mol Biol 215 403-410

[9] Weisshaar B(2012)Basic local alignment search tool Nucleic Acids Res 40 D1211-D1215

[10] Szabados L(2000)GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database Plant Physiol 124 1477-1480

[1] Initiative TAG(2000)Analysis of the genome sequence of the flowering plant Nature 408 796-815

[2] Alonso JM(2006)Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis Nat Rev Genet 7 524-536

[3] Ecker JR(2003)An Plant Mol Biol 53 247-259

[4] Rosso MG(2002) T-DNA mutagenised population (GABI-Kat) for flanking sequence tag based reverse genetics Plant J 32 233-242

[5] Li Y(2006)Distribution of 1000 sequenced T-DNA tags in the Arabidopsis genome Genomics 87 645-652

[6] Strizhov N(2007)Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions Plant J 51 779-791

[7] Reiss B(2003)Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions BioTechniques 35 1164-1168

[8] Dekker K(1990)High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines J Mol Biol 215 403-410

[9] Weisshaar B(2012)Basic local alignment search tool Nucleic Acids Res 40 D1211-D1215

[10] Szabados L(2000)GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database Plant Physiol 124 1477-1480