MeShClust v3.0: high-quality clustering of DNA sequences using the mean shift algorithm and alignment-free identity scores

[1] Borredá C(2019)Reprogramming of Retrotransposon Activity during Speciation of the Genus Citrus Genome Biol Evol 11 3478-95

[2] Pérez-Román E(2020)Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate Nat Commun 11 4488-28

[3] Ibanez V(2021)A mosquito small RNA genomics resource reveals dynamic evolution and host responses to viruses and transposons Genome Res 31 512-20

[4] Terol J(2021)Analysis of SINE families B2, Dip, and Ves with special reference to polyadenylation signals and transcription terminators Int J Mol Sci 22 9897-32

[5] Talon M(2020)The role of the gut microbiome in resisting Norovirus infection as revealed by a human challenge study mBio 11 02634-16

[6] Abrouk M(2021)Gulf of mexico blue hole harbors high levels of novel microbial lineages ISME J 15 2206-1

[7] Ahmed HI(2008)Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening BMC Genomics 9 351-53

[8] Cubry P(2008)Repeats and EST analysis for new organisms BMC Genomics 9 23-8

[9] Šimoníková D(2009)A Plasmodium falciparum FcB1-schizont-EST collection providing clues to schizont specific gene structure and polymorphism BMC Genomics 10 235-9

[10] Cauet S(2020)Review of hepatitis E virus in rats: Evident risk of species orthohepevirus C to human zoonotic infection and disease Viruses 12 1148-19

[1] Borredá C(2019)Reprogramming of Retrotransposon Activity during Speciation of the Genus Citrus Genome Biol Evol 11 3478-95

[2] Pérez-Román E(2020)Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate Nat Commun 11 4488-28

[3] Ibanez V(2021)A mosquito small RNA genomics resource reveals dynamic evolution and host responses to viruses and transposons Genome Res 31 512-20

[4] Terol J(2021)Analysis of SINE families B2, Dip, and Ves with special reference to polyadenylation signals and transcription terminators Int J Mol Sci 22 9897-32

[5] Talon M(2020)The role of the gut microbiome in resisting Norovirus infection as revealed by a human challenge study mBio 11 02634-16

[6] Abrouk M(2021)Gulf of mexico blue hole harbors high levels of novel microbial lineages ISME J 15 2206-1

[7] Ahmed HI(2008)Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening BMC Genomics 9 351-53

[8] Cubry P(2008)Repeats and EST analysis for new organisms BMC Genomics 9 23-8

[9] Šimoníková D(2009)A Plasmodium falciparum FcB1-schizont-EST collection providing clues to schizont specific gene structure and polymorphism BMC Genomics 10 235-9

[10] Cauet S(2020)Review of hepatitis E virus in rats: Evident risk of species orthohepevirus C to human zoonotic infection and disease Viruses 12 1148-19