Chromosome-level genome assembly of the Asian aspen Populus davidiana Dode

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作者
Eun-Kyung Bae
Min-Jeong Kang
Seung-Jae Lee
Eung-Jun Park
Ki-Tae Kim
机构
[1] National Institute of Forest Science,Department of Forest Bioresources
[2] Korea University,Division of Biotechnology, College of Life Sciences and Biotechnology
[3] Sunchon National University,Department of Agricultural Life Science
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Scientific Data | / 10卷
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摘要
The genome of Populus davidiana, a keystone aspen species, has been sequenced to improve our understanding of the evolutionary and functional genomics of the Populus genus. The Hi-C scaffolding genome assembly resulted in a 408.1 Mb genome with 19 pseudochromosomes. The BUSCO assessment revealed that 98.3% of the genome matched the embryophytes dataset. A total of 31,862 protein-coding sequences were predicted, of which 31,619 were functionally annotated. The assembled genome was composed of 44.9% transposable elements. These findings provide new knowledge about the characteristics of the P. davidiana genome and will facilitate comparative genomics and evolutionary research on the genus Populus.
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