Temporal changes in the gene expression heterogeneity during brain development and aging

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作者
Ulaş Işıldak
Mehmet Somel
Janet M. Thornton
Handan Melike Dönertaş
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[1] Middle East Technical University,Department of Biological Sciences
[2] Wellcome Trust Genome Campus,European Molecular Biology Laboratory, European Bioinformatics Institute
[3] Hinxton,undefined
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Scientific Reports | / 10卷
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摘要
Cells in largely non-mitotic tissues such as the brain are prone to stochastic (epi-)genetic alterations that may cause increased variability between cells and individuals over time. Although increased inter-individual heterogeneity in gene expression was previously reported, whether this process starts during development or if it is restricted to the aging period has not yet been studied. The regulatory dynamics and functional significance of putative aging-related heterogeneity are also unknown. Here we address these by a meta-analysis of 19 transcriptome datasets from three independent studies, covering diverse human brain regions. We observed a significant increase in inter-individual heterogeneity during aging (20 + years) compared to postnatal development (0 to 20 years). Increased heterogeneity during aging was consistent among different brain regions at the gene level and associated with lifespan regulation and neuronal functions. Overall, our results show that increased expression heterogeneity is a characteristic of aging human brain, and may influence aging-related changes in brain functions.
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  • [1] Gorbunova V(2007)Changes in DNA repair during aging Nucleic Acids Res. 35 7466-74
  • [2] Seluanov A(2004)Gene regulation and DNA damage in the ageing human brain Nature 429 883-891
  • [3] Mao Z(2004)Mapping Changes in the Human Cortex throughout the Span of Life Neurosci. 10 372-392
  • [4] Hine C(2013)Increased axonal bouton dynamics in the aging mouse cortex Proc. Natl. Acad. Sci. 110 E1514-E1523
  • [5] Lu T(2013)Cell biology of normal brain aging: synaptic plasticity–cell death Aging Clin. Exp. Res. 25 25-34
  • [6] Sowell ER(2007)Transcriptional regulation of vertebrate axon guidance and synapse formation Nat. Rev. Neurosci. 8 331-340
  • [7] Thompson PM(2009)microRNAs at the synapse Nat. Rev. Neurosci. 10 842-849
  • [8] Toga AW(2008)Small non-coding RNAs in animal development Nat. Rev. Mol. Cell Biol. 9 219-230
  • [9] Grillo FW(2011)Spatio-temporal transcriptome of the human brain Nature 478 483-489
  • [10] Dorszewska J(2014)Transcriptional landscape of the prenatal human brain Nature 508 199-206