Comparative transcriptomics and co-expression networks reveal cultivar-specific molecular signatures associated with reproductive-stage cold stress in rice

被引：0
|
作者：
Yuan Niu
Song Fan
Baoshan Cheng
Henan Li
Jiang Wu
Hongliang Zhao
Zhiwei Huang
Feiyu Yan
Bo Qi
Linqing Zhang
Guoliang Zhang
机构：
[1] Huaiyin Institute of Technology,School of Life Science and Food Engineering
[2] Huaiyin Institute of Agricultural Science in Xuhuai Region of Jiangsu Province,undefined
[3] Shanghai Bioelectronica Limited Liability Company,undefined
[4] State Key Laboratory of Soil and Agricultural Sustainable Development,undefined
[5] Jiangsu Key Laboratory of Attapulgite Clay Resource Utilization,undefined
来源：
Plant Cell Reports | 2023年 / 42卷
关键词：
Rice; Cold tolerance; Reproductive stage; Transcriptome; Co-expression network;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
页码：707 / 722
页数：15
相关论文
共 13 条
  • [1] Comparative transcriptomics and co-expression networks reveal cultivar-specific molecular signatures associated with reproductive-stage cold stress in rice
    Niu, Yuan
    Fan, Song
    Cheng, Baoshan
    Li, Henan
    Wu, Jiang
    Zhao, Hongliang
    Huang, Zhiwei
    Yan, Feiyu
    Qi, Bo
    Zhang, Linqing
    Zhang, Guoliang
    PLANT CELL REPORTS, 2023, 42 (04) : 707 - 722
  • [2] Comparative Transcriptomics and Co-Expression Networks Reveal Tissue- and Genotype-Specific Responses of qDTYs to Reproductive-Stage Drought Stress in Rice (Oryza sativa L.)
    Tarun, Jeshurun Asher
    Mauleon, Ramil
    Arbelaez, Juan David
    Catausan, Sheryl
    Dixit, Shalabh
    Kumar, Arvind
    Brown, Patrick
    Kohli, Ajay
    Kretzschmar, Tobias
    GENES, 2020, 11 (10) : 1 - 27
  • [3] Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with different rooting depth responses to drought stress in potato
    Qin, Tianyuan
    Ali, Kazim
    Wang, Yihao
    Dormatey, Richard
    Yao, Panfeng
    Bi, Zhenzhen
    Liu, Yuhui
    Sun, Chao
    Bai, Jiangping
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [4] Global Transcriptome and Correlation Analysis Reveal Cultivar-Specific Molecular Signatures Associated with Fruit Development and Fatty Acid Determination in Camellia oleifera Abel
    Peng, Shaofeng
    Lu, Jia
    Zhang, Zhen
    Ma, Li
    Liu, Caixia
    Chen, Yongzhong
    INTERNATIONAL JOURNAL OF GENOMICS, 2020, 2020
  • [5] Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with seed development and seed size/weight determination in chickpea
    Garg, Rohini
    Singh, Vikash K.
    Rajkumar, Mohan Singh
    Kumar, Vinay
    Jain, Mukesh
    PLANT JOURNAL, 2017, 91 (06): : 1088 - 1107
  • [6] Stress genomics revisited: gene co-expression analysis identifies molecular signatures associated with childhood adversity
    Dieckmann, Linda
    Cole, Steve
    Kumsta, Robert
    TRANSLATIONAL PSYCHIATRY, 2020, 10 (01)
  • [7] Stress genomics revisited: gene co-expression analysis identifies molecular signatures associated with childhood adversity
    Linda Dieckmann
    Steve Cole
    Robert Kumsta
    Translational Psychiatry, 10
  • [8] Cultivar-, stress duration- and leaf age-specific hub genes and co-expression networks responding to waterlogging in barley
    Chen, Si
    Xu, Zhengyuan
    Adil, Muhammad Faheem
    Zhang, Guoping
    ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 2021, 191
  • [9] Systems Biology Approaches Reveal a Multi-stress Responsive WRKY Transcription Factor and Stress Associated Gene Co-expression Networks in Chickpea
    Konda, Aravind K.
    Sabale, Parasappa R.
    Soren, Khela R.
    Subramaniam, Shanmugavadivel P.
    Singh, Pallavi
    Rathod, Santosh
    Chaturvedi, Sushil K.
    Singh, Narendra P.
    CURRENT BIOINFORMATICS, 2019, 14 (07) : 591 - 601
  • [10] Transcriptomics and co-expression networks reveal tissue-specific responses and regulatory hubs under mild and severe drought in papaya (Carica papaya L.)
    Samuel David Gamboa-Tuz
    Alejandro Pereira-Santana
    Jesús Alejandro Zamora-Briseño
    Enrique Castano
    Francisco Espadas-Gil
    Jorge Tonatiuh Ayala-Sumuano
    Miguel Ángel Keb-Llanes
    Felipe Sanchez-Teyer
    Luis Carlos Rodríguez-Zapata
    Scientific Reports, 8
12