Whole-transcriptome sequence analysis of differentially expressed genes in Phormium tenax under drought stress

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作者
Zhen-yu Bai
Tong Wang
Yin-huan Wu
Ke Wang
Qian-yu Liang
Yuan-zhi Pan
Bei-bei Jiang
Lei Zhang
Guang-li Liu
Yin Jia
Qing-lin Liu
机构
[1] Sichuan Agricultural University,Department of Ornamental Horticulture
[2] 211 Huimin Road,undefined
[3] Wenjiang District,undefined
[4] Chengdu,undefined
[5] Sichuan 611130,undefined
[6] P.R. China,undefined
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摘要
Phormium tenax is a kind of drought resistant garden plant with its rich and colorful leaves. To clarify the molecular mechanism of drought resistance in Phormium tenax, transcriptome was sequenced by the Illumina sequencing technology under normal and drought stress, respectively. A large number of contigs, transcripts and unigenes were obtained. Among them, only 30,814 unigenes were annotated by comparing with the protein databases. A total of 4,380 genes were differentially expressed, 2,698 of which were finally annotated under drought stress. Differentially expression analysis was also performed upon drought treatment. In KEGG pathway, the mechanism of drought resistance in Phormium tenax was explained from three aspects of metabolism and signaling of hormones, osmotic adjustment and reactive oxygen species metabolism. These results are helpful to understand the drought tolerance mechanism of Phormium tenax and will provide a precious genetic resource for drought-resistant vegetation breeding and research.
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