Tracking Fish Abundance by Underwater Image Recognition

被引:111
作者
Marini, Simone [1 ]
Fanelli, Emanuela [2 ]
Sbragaglia, Valerio [3 ,4 ]
Azzurro, Ernesto [4 ]
Del Rio Fernandez, Joaquin [5 ]
Aguzzi, Jacopo [6 ]
机构
[1] Inst Marine Sci, Forte Santa Teresa, Natl Res Council Italy, I-19032 La Spezia, Italy
[2] Polytech Univ Marche, Dept Life & Environm Sci, Via Brecce Bianche, Ancona, Italy
[3] Leibniz Inst Freshwater Ecol & Inland Fisheries, Dept Biol & Ecol Fishes, Muggelseedamm 310, D-12587 Berlin, Germany
[4] Inst Environm Protect & Res ISPRA, Livorno, Italy
[5] UPC, Elect Dept, Sarti Res Group, Rambla Exposicio 24, Vilanova I La Geltru 08800, Spain
[6] CSIC, ICM, Paseo Maritimo Barceloneta 37-49, E-08003 Barcelona, Spain
关键词
CLIMATE-CHANGE; MARINE; BEHAVIOR; IMPACTS;
D O I
10.1038/s41598-018-32089-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Marine cabled video-observatories allow the non-destructive sampling of species at frequencies and durations that have never been attained before. Nevertheless, the lack of appropriate methods to automatically process video imagery limits this technology for the purposes of ecosystem monitoring. Automation is a prerequisite to deal with the huge quantities of video footage captured by cameras, which can then transform these devices into true autonomous sensors. In this study, we have developed a novel methodology that is based on genetic programming for content-based image analysis. Our aim was to capture the temporal dynamics of fish abundance. We processed more than 20,000 images that were acquired in a challenging real-world coastal scenario at the OBSEA-EMSO testing-site. The images were collected at 30-min. frequency, continuously for two years, over day and night. The highly variable environmental conditions allowed us to test the effectiveness of our approach under changing light radiation, water turbidity, background confusion, and bio-fouling growth on the camera housing. The automated recognition results were highly correlated with the manual counts and they were highly reliable when used to track fish variations at different hourly, daily, and monthly time scales. In addition, our methodology could be easily transferred to other cabled video-observatories.
引用
收藏
页数:12
相关论文
共 59 条
[51]   Fish identification from videos captured in uncontrolled underwater environments [J].
Shafait, Faisal ;
Mian, Ajmal ;
Shortis, Mark ;
Ghanem, Bernard ;
Culverhouse, Phil F. ;
Edgington, Duane ;
Cline, Danelle ;
Ravanbakhsh, Mehdi ;
Seager, James ;
Harvey, Euan S. .
ICES JOURNAL OF MARINE SCIENCE, 2016, 73 (10) :2737-2746
[52]   Understanding fish behavior during typhoon events in real-life underwater environments [J].
Spampinato, Concetto ;
Palazzo, Simone ;
Boom, Bastian ;
van Ossenbruggen, Jacco ;
Kavasidis, Isaak ;
Di Salvo, Roberto ;
Lin, Fang-Pang ;
Giordano, Daniela ;
Hardman, Lynda ;
Fisher, Robert B. .
MULTIMEDIA TOOLS AND APPLICATIONS, 2014, 70 (01) :199-236
[53]   TOPOLOGICAL STRUCTURAL-ANALYSIS OF DIGITIZED BINARY IMAGES BY BORDER FOLLOWING [J].
SUZUKI, S ;
ABE, K .
COMPUTER VISION GRAPHICS AND IMAGE PROCESSING, 1985, 30 (01) :32-46
[54]   Global patterns and predictors of marine biodiversity across taxa [J].
Tittensor, Derek P. ;
Mora, Camilo ;
Jetz, Walter ;
Lotze, Heike K. ;
Ricard, Daniel ;
Vanden Berghe, Edward ;
Worm, Boris .
NATURE, 2010, 466 (7310) :1098-U107
[55]   Improving the forecast for biodiversity under climate change [J].
Urban, M. C. ;
Bocedi, G. ;
Hendry, A. P. ;
Mihoub, J. -B. ;
Pe'er, G. ;
Singer, A. ;
Bridle, J. R. ;
Crozier, L. G. ;
De Meester, L. ;
Godsoe, W. ;
Gonzalez, A. ;
Hellmann, J. J. ;
Holt, R. D. ;
Huth, A. ;
Johst, K. ;
Krug, C. B. ;
Leadley, P. W. ;
Palmer, S. C. F. ;
Pantel, J. H. ;
Schmitz, A. ;
Zollner, P. A. ;
Travis, J. M. J. .
SCIENCE, 2016, 353 (6304) :1113-+
[56]   Fish behaviour relevant to fish catchability [J].
Walsh, SJ ;
Godo, OR ;
Michalsen, K .
ICES JOURNAL OF MARINE SCIENCE, 2004, 61 (07) :1238-1239
[57]   OCEANOGRAPHY'S BILLION-DOLLAR BABY [J].
Witze, Alexandra .
NATURE, 2013, 501 (7468) :480-482
[58]   In situ glass antifouling using Pt nanoparticle coating for periodic electrolysis of seawater [J].
Xue, Yuxi ;
Zhao, Jin ;
Qiu, Ri ;
Zheng, Jiyong ;
Lin, Cunguo ;
Ma, Bojiang ;
Wang, Peng .
APPLIED SURFACE SCIENCE, 2015, 357 :60-68
[59]   The use of computer vision technologies in aquaculture - A review [J].
Zion, Boaz .
COMPUTERS AND ELECTRONICS IN AGRICULTURE, 2012, 88 :125-132