Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis

被引:35
作者
Burschowsky, Daniel [1 ]
van Eerde, Andre [1 ]
Oekvist, Mats [1 ]
Kienhoefer, Alexander [2 ]
Kast, Peter [2 ]
Hilvert, Donald [2 ]
Krengel, Ute [1 ]
机构
[1] Univ Oslo, Dept Chem, NO-0315 Oslo, Norway
[2] ETH, Organ Chem Lab, CH-8093 Zurich, Switzerland
基金
瑞士国家科学基金会;
关键词
pericyclic reaction; catalysis; enzyme mechanism; near attack conformation; X-ray crystal structures; ESCHERICHIA-COLI MUTASE; BACILLUS-SUBTILIS; ACTIVE-SITE; PROTEIN-STRUCTURE; ENZYME; PREPHENATE; REARRANGEMENT; MECHANISM; ANTIBODY; THERMODYNAMICS;
D O I
10.1073/pnas.1408512111
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
For more than half a century, transition state theory has provided a useful framework for understanding the origins of enzyme catalysis. As proposed by Pauling, enzymes accelerate chemical reactions by binding transition states tighter than substrates, thereby lowering the activation energy compared with that of the corresponding uncatalyzed process. This paradigm has been challenged for chorismate mutase (CM), a well-characterized metabolic enzyme that catalyzes the rearrangement of chorismate to prephenate. Calculations have predicted the decisive factor in CM catalysis to be ground state destabilization rather than transition state stabilization. Using X-ray crystallography, we show, in contrast, that a sluggish variant of Bacillus subtilis CM, in which a cationic active-site arginine was replaced by a neutral citrulline, is a poor catalyst even though it effectively preorganizes chorismate for the reaction. A series of high-resolution molecular snapshots of the reaction coordinate, including the apo enzyme, and complexes with substrate, transition state analog and product, demonstrate that an active site, which is only complementary in shape to a reactive substrate conformer, is insufficient for effective catalysis. Instead, as with other enzymes, electrostatic stabilization of the CM transition state appears to be crucial for achieving high reaction rates.
引用
收藏
页码:17516 / 17521
页数:6
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