Amplicon sequencing;
Anaerobic digestion;
Fingerprinting;
Methanogenesis;
Microbiome;
EARLY WARNING INDICATORS;
PROCESS FAILURE;
COMMUNITY;
SCALE;
WASTE;
SLUDGE;
PERSPECTIVES;
REDUNDANCY;
PARAMETERS;
DIVERSITY;
D O I:
10.1016/j.ese.2020.100032
中图分类号:
X [环境科学、安全科学];
学科分类号:
08 ;
0830 ;
摘要:
The anaerobic digestion process has been one of the key processes for renewable energy recovery from organic waste streams for over a century. The anaerobic digestion microbiome is, through the continuous development of novel techniques, evolving from a black box to a well-defined consortium, but we are not there yet. In this perspective, I provide my view on the current status and challenges of the anaerobic digestion microbiome, as well as the opportunities and solutions to exploit it. I consider identification and fingerprinting of the anaerobic digestion microbiome as complementary tools to monitor the anaerobic digestion microbiome. However, data availability, method-inherent biases and correct taxa identification hamper the accuracy and reproducibility of anaerobic digestion microbiome characterization. Standardisation of microbiome research in anaerobic digestion and other engineered systems will be essential in the coming decades, for which I proposed some targeted solutions. These will bring anaerobic digestion from a single-purpose energy-recovery technology to a versatile process for integrated resource recovery. It is my opinion that the exploitation of the microbiome will be a driver of innovation, and that it has a key role to play in the bio-based economy of the decades to come. (C) 2020 The Author(s). Published by Elsevier B.V. on behalf of Chinese Society for Environmental Sciences, Harbin Institute of Technology, Chinese Research Academy of Environmental Sciences.
机构:
Raytheon BBN Technol, Cambridge, MA USARaytheon BBN Technol, Cambridge, MA USA
Beal, Jacob
;
Goni-Moreno, Angel
论文数: 0引用数: 0
h-index: 0
机构:
Newcastle Univ, Sch Comp, Newcastle Upon Tyne, Tyne & Wear, England
UPM, CBGP, INIA, Pozuelo De Alarcon, SpainRaytheon BBN Technol, Cambridge, MA USA
Goni-Moreno, Angel
;
Myers, Chris
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Salt Lake City, UT USARaytheon BBN Technol, Cambridge, MA USA
Myers, Chris
;
Hecht, Ariel
论文数: 0引用数: 0
h-index: 0
机构:
Ginkgo Bioworks Inc, Boston, MA USARaytheon BBN Technol, Cambridge, MA USA
Hecht, Ariel
;
de Vicente, Maria del Carmen
论文数: 0引用数: 0
h-index: 0
机构:
European Commiss, Directorate Gen Res & Innovat, Brussels, BelgiumRaytheon BBN Technol, Cambridge, MA USA
de Vicente, Maria del Carmen
;
Parco, Maria
论文数: 0引用数: 0
h-index: 0
机构:
IN Srl, Udine, ItalyRaytheon BBN Technol, Cambridge, MA USA
Parco, Maria
;
Schmidt, Markus
论文数: 0引用数: 0
h-index: 0
机构:
Biofaction, Vienna, AustriaRaytheon BBN Technol, Cambridge, MA USA
Schmidt, Markus
;
Timmis, Kenneth
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Carolo Wilhelmina Braunschweig, Inst Microbiol, Braunschweig, GermanyRaytheon BBN Technol, Cambridge, MA USA
Timmis, Kenneth
;
Baldwin, Geoff
论文数: 0引用数: 0
h-index: 0
机构:
Imperial Coll, London, EnglandRaytheon BBN Technol, Cambridge, MA USA
Baldwin, Geoff
;
Friedrichs, Steffi
论文数: 0引用数: 0
h-index: 0
机构:
AcumenIST, Brussels, BelgiumRaytheon BBN Technol, Cambridge, MA USA
Friedrichs, Steffi
;
Freemont, Paul
论文数: 0引用数: 0
h-index: 0
机构:
Imperial Coll, London, EnglandRaytheon BBN Technol, Cambridge, MA USA
Freemont, Paul
;
论文数: 引用数:
h-index:
机构:
Kiga, Daisuke
;
Ordozgoiti, Elena
论文数: 0引用数: 0
h-index: 0
机构:
Asociac Espanola Normalizac UNE, Madrid, SpainRaytheon BBN Technol, Cambridge, MA USA
Ordozgoiti, Elena
;
Rennig, Maja
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Denmark, Novo Nordisk Fdn, Ctr Biosustainabil, Lyngby, DenmarkRaytheon BBN Technol, Cambridge, MA USA
机构:
NC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA
Callahan, Benjamin J.
;
McMurdie, Paul J.
论文数: 0引用数: 0
h-index: 0
机构:
Whole Biome Inc, San Francisco, CA USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA
McMurdie, Paul J.
;
Holmes, Susan P.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Stat, Stanford, CA 94305 USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA
机构:
Raytheon BBN Technol, Cambridge, MA USARaytheon BBN Technol, Cambridge, MA USA
Beal, Jacob
;
Goni-Moreno, Angel
论文数: 0引用数: 0
h-index: 0
机构:
Newcastle Univ, Sch Comp, Newcastle Upon Tyne, Tyne & Wear, England
UPM, CBGP, INIA, Pozuelo De Alarcon, SpainRaytheon BBN Technol, Cambridge, MA USA
Goni-Moreno, Angel
;
Myers, Chris
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Salt Lake City, UT USARaytheon BBN Technol, Cambridge, MA USA
Myers, Chris
;
Hecht, Ariel
论文数: 0引用数: 0
h-index: 0
机构:
Ginkgo Bioworks Inc, Boston, MA USARaytheon BBN Technol, Cambridge, MA USA
Hecht, Ariel
;
de Vicente, Maria del Carmen
论文数: 0引用数: 0
h-index: 0
机构:
European Commiss, Directorate Gen Res & Innovat, Brussels, BelgiumRaytheon BBN Technol, Cambridge, MA USA
de Vicente, Maria del Carmen
;
Parco, Maria
论文数: 0引用数: 0
h-index: 0
机构:
IN Srl, Udine, ItalyRaytheon BBN Technol, Cambridge, MA USA
Parco, Maria
;
Schmidt, Markus
论文数: 0引用数: 0
h-index: 0
机构:
Biofaction, Vienna, AustriaRaytheon BBN Technol, Cambridge, MA USA
Schmidt, Markus
;
Timmis, Kenneth
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Carolo Wilhelmina Braunschweig, Inst Microbiol, Braunschweig, GermanyRaytheon BBN Technol, Cambridge, MA USA
Timmis, Kenneth
;
Baldwin, Geoff
论文数: 0引用数: 0
h-index: 0
机构:
Imperial Coll, London, EnglandRaytheon BBN Technol, Cambridge, MA USA
Baldwin, Geoff
;
Friedrichs, Steffi
论文数: 0引用数: 0
h-index: 0
机构:
AcumenIST, Brussels, BelgiumRaytheon BBN Technol, Cambridge, MA USA
Friedrichs, Steffi
;
Freemont, Paul
论文数: 0引用数: 0
h-index: 0
机构:
Imperial Coll, London, EnglandRaytheon BBN Technol, Cambridge, MA USA
Freemont, Paul
;
论文数: 引用数:
h-index:
机构:
Kiga, Daisuke
;
Ordozgoiti, Elena
论文数: 0引用数: 0
h-index: 0
机构:
Asociac Espanola Normalizac UNE, Madrid, SpainRaytheon BBN Technol, Cambridge, MA USA
Ordozgoiti, Elena
;
Rennig, Maja
论文数: 0引用数: 0
h-index: 0
机构:
Tech Univ Denmark, Novo Nordisk Fdn, Ctr Biosustainabil, Lyngby, DenmarkRaytheon BBN Technol, Cambridge, MA USA
机构:
NC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA
Callahan, Benjamin J.
;
McMurdie, Paul J.
论文数: 0引用数: 0
h-index: 0
机构:
Whole Biome Inc, San Francisco, CA USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA
McMurdie, Paul J.
;
Holmes, Susan P.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Stat, Stanford, CA 94305 USANC State Univ, Dept Populat Hlth & Pathobiol, 1051 William Moore Dr, Raleigh, NC 27606 USA