The Combined Effect of Hydrophobic Mismatch and Bilayer Local Bending on the Regulation of Mechanosensitive Ion Channels

被引:22
|
作者
Bavi, Omid [1 ]
Vossoughi, Manouchehr [1 ,2 ]
Naghdabadi, Reza [1 ,3 ]
Jamali, Yousef [4 ,5 ]
机构
[1] Sharif Univ Technol, Inst Nanosci & Nanotechnol, Tehran, Iran
[2] Biochem & Bioenvironm Res Ctr, Tehran, Iran
[3] Sharif Univ Technol, Dept Mech Engn, Tehran, Iran
[4] Tarbiat Modares Univ, Dept Math, Tehran, Iran
[5] Sch Nanosci Inst Res Fundamental Sci IPM, Computat Phys Sci Res Lab, Tehran, Iran
来源
PLOS ONE | 2016年 / 11卷 / 03期
关键词
LARGE-CONDUCTANCE; GATING MECHANISMS; LIPID-COMPOSITION; PRESSURE PROFILE; MSCL; MEMBRANE; PROTEIN; CURVATURE; INSIGHTS; TREK-1;
D O I
10.1371/journal.pone.0150578
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The hydrophobic mismatch between the lipid bilayer and integral membrane proteins has well-defined effect on mechanosensitive (MS) ion channels. Also, membrane local bending is suggested to modulate MS channel activity. Although a number of studies have already shown the significance of each individual factor, the combined effect of these physical factors on MS channel activity have not been investigated. Here using finite element simulation, we study the combined effect of hydrophobic mismatch and local bending on the archetypal mechanosensitive channel MscL. First we show how the local curvature direction impacts on MS channel modulation. In the case of MscL, we show inward (cytoplasmic) bending can more effectively gate the channel compared to outward bending. Then we indicate that in response to a specific local curvature, MscL inserted in a bilayer with the same hydrophobic length is more expanded in the constriction pore region compared to when there is a protein-lipid hydrophobic mismatch. Interestingly in the presence of a negative mismatch (thicker lipids), MscL constriction pore is more expanded than in the presence of positive mismatch (thinner lipids) in response to an identical membrane curvature. These results were confirmed by a parametric energetic calculation provided for MscL gating. These findings have several biophysical consequences for understanding the function of MS channels in response to two major physical stimuli in mechanobiology, namely hydrophobic mismatch and local membrane curvature.
引用
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页数:13
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