Driven DNA transport into an asymmetric nanometer-scale pore

被引:450
作者
Henrickson, SE
Misakian, M
Robertson, B
Kasianowicz, JJ [1 ]
机构
[1] NIST, Div Biotechnol, Gaithersburg, MD 20899 USA
[2] NIST, Div Elect, Gaithersburg, MD 20899 USA
关键词
D O I
10.1103/PhysRevLett.85.3057
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
To understand the mechanism by which individual DNA molecules enter nanometer-scale pores, we studied the concentration and voltage dependence of polynucleotide-induced ionic-current blockades of a single cu-hemolysin ion channel. We find that the blockade frequency is proportional to the polymer concentration, that it increases exponentially with the applied potential, and that DNA enters the pore more readily through the entrance that has the larger vestibule. We also measure the minimum value of the electrical potential that confines a modified polymer inside the pore against random diffusion and repulsive forces.
引用
收藏
页码:3057 / 3060
页数:4
相关论文
共 30 条
[1]   Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules [J].
Akeson, M ;
Branton, D ;
Kasianowicz, JJ ;
Brandin, E ;
Deamer, DW .
BIOPHYSICAL JOURNAL, 1999, 77 (06) :3227-3233
[2]  
BARD AJ, 1980, ELECTROCHEMICAL METH
[3]   PHYSICS OF CHEMORECEPTION [J].
BERG, HC ;
PURCELL, EM .
BIOPHYSICAL JOURNAL, 1977, 20 (02) :193-219
[4]   CURRENT NOISE REVEALS PROTONATION KINETICS AND NUMBER OF IONIZABLE SITES IN AN OPEN PROTEIN ION CHANNEL [J].
BEZRUKOV, SM ;
KASIANOWICZ, JJ .
PHYSICAL REVIEW LETTERS, 1993, 70 (15) :2352-2355
[5]   COUNTING POLYMERS MOVING THROUGH A SINGLE-ION CHANNEL [J].
BEZRUKOV, SM ;
VODYANOY, I ;
PARSEGIAN, VA .
NATURE, 1994, 370 (6487) :279-281
[6]   Dynamics and free energy of polymers partitioning into a nanoscale pore [J].
Bezrukov, SM ;
Vodyanoy, I ;
Brutyan, RA ;
Kasianowicz, JJ .
MACROMOLECULES, 1996, 29 (26) :8517-8522
[7]  
BEZRUKOV SM, 1997, EUR BIOPHYS J, V6, P47
[8]   CALCIUM CONTROLS PHAGE T5 INFECTION AT THE LEVEL OF THE ESCHERICHIA-COLI CYTOPLASMIC MEMBRANE [J].
BONHIVERS, M ;
LETELLIER, L .
FEBS LETTERS, 1995, 374 (02) :169-173
[9]   MODIFICATION OF LYSINE RESIDUES OF STAPHYLOCOCCUS-AUREUS ALPHA-TOXIN - EFFECTS ON ITS CHANNEL-FORMING PROPERTIES [J].
CESCATTI, L ;
PEDERZOLLI, C ;
MENESTRINA, G .
JOURNAL OF MEMBRANE BIOLOGY, 1991, 119 (01) :53-64
[10]  
de Gennes P.G., 1979, SCALING CONCEPTS POL