Amplicon of 16S rRNA Gene Sequencing of Fertilized Volcanic Soils from Southern Chile

被引:0
|
作者
Vargas, Rodrigo A. [1 ]
Valdes, Natalia [2 ]
Balic, Ivan [3 ]
Contreras, Eduardo, I [1 ]
Venegas, Carlos [4 ]
Aranada, Carlos P. [5 ]
Tello, Mario [2 ]
Gonzalez, Alex R. [1 ]
机构
[1] Univ Los Lagos, Dept Ciencias Biol & Biodiversidad, Lab Microbiol Ambiental & Extremofilos, Osorno, Chile
[2] Univ Santiago Chile, Fac Quim & Biol, Lab Metagen Bacteriana, Santiago, Chile
[3] Univ Los Lagos, Dept Acuicultura & Recursos Agroalimentarios, Osorno, Chile
[4] Ctr Educ & Tecnol CET, Chonchi, Chiloe, Chile
[5] Univ Lagos, Dept Ciencias Biol, Osorno, Chile
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2021年 / 10卷 / 12期
关键词
D O I
10.1128/MRA.00590-20
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The volcanic soils of Chiloe Island, Chile, have physical and chemical characteristics that affect their productivity. We report here a 16S rRNA gene analysis that characterizes the predominant microbial communities in volcanic soils of Chiloe either in the presence or absence of fertilization. The major phyla identified were Proteobacteria, Acidobacteria, and Actinobacteria.
引用
收藏
页数:3
相关论文
共 50 条
  • [21] Improving environmental monitoring of Vibrionaceae in coastal ecosystems through 16S rRNA gene amplicon sequencing
    Banchi, Elisa
    Manna, Vincenzo
    Fonti, Viviana
    Fabbro, Cinzia
    Celussi, Mauro
    ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2022, 29 (44) : 67466 - 67482
  • [22] Seasonal dynamics of lotic bacterial communities assessed by 16S rRNA gene amplicon deep sequencing
    Lisa Paruch
    Adam M. Paruch
    Hans Geir Eiken
    Monica Skogen
    Roald Sørheim
    Scientific Reports, 10
  • [23] Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing
    Tourlousse, Dieter M.
    Yoshiike, Satowa
    Ohashi, Akiko
    Matsukura, Satoko
    Noda, Naohiro
    Sekiguchi, Yuji
    NUCLEIC ACIDS RESEARCH, 2017, 45 (04) : e23
  • [24] Influence of PCR cycle number on 16S rRNA gene amplicon sequencing of low biomass samples
    Witzke, Monica C.
    Gullic, Alexis
    Yang, Peggy
    Bivens, Nathan J.
    Adkins, Pamela R. F.
    Ericsson, Aaron C.
    JOURNAL OF MICROBIOLOGICAL METHODS, 2020, 176
  • [25] Processing human urine and ureteral stents for 16S rRNA amplicon sequencing
    Al, Kait F.
    Burton, Jeremy P.
    STAR PROTOCOLS, 2021, 2 (02):
  • [26] Comprehensive Assessment of 16S rRNA Gene Amplicon Sequencing for Microbiome Profiling across Multiple Habitats
    Zhang, Wenke
    Fan, Xiaoqian
    Shi, Haobo
    Li, Jian
    Zhang, Mingqian
    Zhao, Jin
    Su, Xiaoquan
    MICROBIOLOGY SPECTRUM, 2023, 11 (03):
  • [27] Bacterial communities of Antarctic lichens explored by gDNA and cDNA 16S rRNA gene amplicon sequencing
    Woltynska, Aleksandra
    Gawor, Jan
    Olech, Maria A.
    Gorniak, Dorota
    Grzesiak, Jakub
    FEMS MICROBIOLOGY ECOLOGY, 2023, 99 (03)
  • [28] Detection of pathogenic bacteria in the blood from sepsis patients using 16S rRNA gene amplicon sequencing analysis
    Watanabe, Nobuo
    Kryukov, Kirill
    Nakagawa, So
    Takeuchi, Junko S.
    Takeshita, Meiko
    Kirimura, Yukiko
    Mitsuhashi, Satomi
    Ishihara, Toru
    Aoki, Hiromichi
    Inokuchi, Sadaki
    Imanishi, Tadashi
    Inoue, Shigeaki
    PLOS ONE, 2018, 13 (08):
  • [29] 16S rRNA Gene Amplicon Sequencing of Gut Microbiota Affected by Four Probiotic Strains in Mice
    Ren, Jianwei
    He, Fang
    Yu, Detao
    Xu, Hang
    Li, Nianfeng
    Cao, Zhi
    Wen, Jianxin
    VETERINARY SCIENCES, 2023, 10 (04)
  • [30] 16S rRNA Amplicon Sequencing of Microbial Biofilms from Marsberg Copper Mine, Germany
    Arif, Sania
    Schliekmann, Elias
    Hoppert, Michael
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2021, 10 (05):