Improving the reliability of eDNA data interpretation

被引:115
作者
Burian, Alfred [1 ,2 ,3 ]
Mauvisseau, Quentin [1 ,4 ]
Bulling, Mark [1 ]
Domisch, Sami [5 ]
Qian, Song [6 ]
Sweet, Michael [1 ]
机构
[1] Univ Derby, Environm Sustainabil Res Ctr, Aquat Res Facil, Derby, England
[2] Lurio Univ, Marine Ecol Dept, Nampula, Mozambique
[3] UFZ Helmholtz Ctr Environm Res, Dept Computat Landscape Ecol, Leipzig, Germany
[4] Univ Oslo, Nat Hist Museum, Oslo, Norway
[5] Leibniz Inst Freshwater Ecol & Inland Fisheries, Berlin, Germany
[6] Univ Toledo, Dept Environm Sci, 2801 W Bancroft St, Toledo, OH 43606 USA
关键词
barcoding; Bayesian analysis; data fusion; detection probability; eDNA; false positives; metabarcoding; occupancy modelling; sources of error; species distribution modelling; FALSE-NEGATIVE ERRORS; ENVIRONMENTAL DNA; SPATIAL AUTOCORRELATION; SPECIES OCCURRENCE; OCCUPANCY; ACCOUNT; MODELS; INTEGRATION; FRAMEWORK; INFERENCE;
D O I
10.1111/1755-0998.13367
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Global declines in biodiversity highlight the need to effectively monitor the density and distribution of threatened species. In recent years, molecular survey methods detecting DNA released by target-species into their environment (eDNA) have been rapidly on the rise. Despite providing new, cost-effective tools for conservation, eDNA-based methods are prone to errors. Best field and laboratory practices can mitigate some, but the risks of errors cannot be eliminated and need to be accounted for. Here, we synthesize recent advances in data processing tools that increase the reliability of interpretations drawn from eDNA data. We review advances in occupancy models to consider spatial data-structures and simultaneously assess rates of false positive and negative results. Further, we introduce process-based models and the integration of metabarcoding data as complementing approaches to increase the reliability of target-species assessments. These tools will be most effective when capitalizing on multi-source data sets collating eDNA with classical survey and citizen-science approaches, paving the way for more robust decision-making processes in conservation planning.
引用
收藏
页码:1422 / 1433
页数:12
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