O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins

被引:20
作者
Hansen, JE [1 ]
Lund, O [1 ]
Nilsson, J [1 ]
Rapacki, K [1 ]
Brunak, S [1 ]
机构
[1] Tech Univ Denmark, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark
关键词
D O I
10.1093/nar/26.1.387
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
O-GLYCBASE is a revised database of information on glycoproteins and their O-linked glycosylation sites, Entries are compiled and revised from the literature, and from the sequence databases, Entries include information about species, sequence, glycosylation sites and glycan type and is fully cross-referenced. Compared to version 2.0 the number of entries has increased by 20%. Sequence logos displaying the acceptor specificity patterns for the GalNAc, mannose and GlcNAc transferases are shown, The O-GLYCBASE database is available through the WWW at http://www.cbs.dtu.dk/databases/OGLYCBASE/.
引用
收藏
页码:387 / 389
页数:3
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