A three miRNAs signature predicts survival in cervical cancer using bioinformatics analysis
被引:54
作者:
Liang, Bin
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China Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
China Med Univ, Key Lab Med Cell Biol, Minist Educ, Coll Basic Med Sci, Shenyang, Peoples R ChinaChina Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
Liang, Bin
[1
,2
]
Li, Yunhui
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202 Hosp PLA, Dept Clin Lab, Shenyang, Peoples R ChinaChina Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
Li, Yunhui
[3
]
Wang, Tianjiao
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机构:
China Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
China Med Univ, Key Lab Med Cell Biol, Minist Educ, Coll Basic Med Sci, Shenyang, Peoples R ChinaChina Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
Wang, Tianjiao
[1
,2
]
机构:
[1] China Med Univ, Dept Bioinformat, Key Lab Cell Biol, Minist Publ Hlth, Shenyang, Peoples R China
[2] China Med Univ, Key Lab Med Cell Biol, Minist Educ, Coll Basic Med Sci, Shenyang, Peoples R China
[3] 202 Hosp PLA, Dept Clin Lab, Shenyang, Peoples R China
Growing evidences showed that a large number of miRNAs were abnormally expressed in cervical cancer tissues and played irreplaceable roles in tumorigenesis, progression and metastasis. The aim of the present study was to identify the differential miRNAs expression between cervical cancer and normal cervical tissues by analyzing the high-throughput miRNA data downloaded from TCGA database. Additionally, we evaluated the prognostic values of the differentially expressed miRNAs and constructed a three-miRNA signature that could effectively predict patient survival. According to the cut-off criteria (P < 0.05 and vertical bar log(2)FC vertical bar > 2.0), a total of 78 differentially expressed miRNAs were identified between cervical cancer tissues and matched normal tissues, including 37 up-regulated miRNAs and 41 down-regulated miRNAs. The Kaplan-Meier survival method revealed the prognostic function of the three miRNAs (miRNA-145, miRNA-200c, and miRNA-218-1). Univariate and multivariate Cox regression analysis showed that the three-miRNA signature was an independent prognostic factor in cervical cancer. The functional enrichment analysis suggested that the target genes of three miRNAs may be involved in various pathways related to cancer, including MAPK, AMPK, focal adhesion, cGMP-PKG, wnt, and mTOR signaling pathway. Taken together, the present study suggested that three-miRNA signature could be used as a prognostic marker in cervical cancer.
机构:Univ Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USA
Shenoy, Archana
;
Blelloch, Robert H.
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Univ Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USA
机构:
Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Wang, Nan
;
Zhou, Yun
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机构:
Wu Han Tumor Hosp, Wuhan, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Zhou, Yun
;
Zheng, Lijuan
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Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Zheng, Lijuan
;
Li, Hui
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机构:
Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
机构:Univ Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USA
Shenoy, Archana
;
Blelloch, Robert H.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USAUniv Calif San Francisco, Ctr Reprod Sci, Eli & Edythe Broad Ctr Regenerat Med & Stem Cell, San Francisco, CA 94143 USA
机构:
Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Wang, Nan
;
Zhou, Yun
论文数: 0引用数: 0
h-index: 0
机构:
Wu Han Tumor Hosp, Wuhan, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Zhou, Yun
;
Zheng, Lijuan
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h-index: 0
机构:
Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China
Zheng, Lijuan
;
Li, Hui
论文数: 0引用数: 0
h-index: 0
机构:
Huazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R ChinaHuazhong Univ Sci & Technol, Ctr Human Genome Res, Key Lab Mol Biophys, Minist Educ,Coll Life Sci & Technol,Cardio X Inst, Wuhan 430074, Peoples R China