Feature Selection for Cancer Classification Based on Support Vector Machine

被引:3
|
作者
Luo, Wei [1 ]
Wang, Lipo [2 ]
Sun, Jingjing [1 ]
机构
[1] Xiangtan Univ, Coll Informat Engn, Xiangtan, Hunan, Peoples R China
[2] Nanyang Technol Univ, Sch Elect & Elect Engn, Singapore, Singapore
关键词
GENE-EXPRESSION DATA; PATTERNS;
D O I
10.1109/GCIS.2009.45
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Feature selection plays an important role in cancer classification, for gene expression data usually have a large number of dimensions and relatively a small number of samples In this paper we use the support vector machine (SVM) for cancer classification. We propose a mixed two-step feature selection method The first step uses a modified t-test method to select discriminatory features The second step extracts principal components from the top-ranked genes based on the modified t-test method We tested our two-step method in three data sets, i e, the lymphoma data set, the SRBCT data set, and the ovarian cancer data set. The results in all the three data sets show our two-step methods is able to achieve 100% accuracy with much fewer genes than other published results
引用
收藏
页码:422 / +
页数:2
相关论文
共 50 条
  • [21] NONPARAMETRIC FEATURE SELECTION AND SUPPORT VECTOR MACHINE FOR POLARIMETRIC SAR DATA CLASSIFICATION
    Maghsoudi, Yasser
    Collins, Michael
    Leckie, Donald G.
    2011 IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM (IGARSS), 2011, : 2857 - 2860
  • [22] Probabilistic Feature Selection and Classification Vector Machine
    Jiang, Bingbing
    Li, Chang
    de Rijke, Maarten
    Yao, Xin
    Chen, Huanhuan
    ACM TRANSACTIONS ON KNOWLEDGE DISCOVERY FROM DATA, 2019, 13 (02)
  • [23] Feature selection in the Laplacian support vector machine
    Lee, Sangjun
    Park, Changyi
    Koo, Ja-Yong
    COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2011, 55 (01) : 567 - 577
  • [24] A Semisupervised Feature Selection with Support Vector Machine
    Dai, Kun
    Yu, Hong-Yi
    Li, Qing
    JOURNAL OF APPLIED MATHEMATICS, 2013,
  • [25] On the Probability of Feature Selection in Support Vector Classification
    Liu, Qunfeng
    Yao, Lan
    2013 IEEE INTERNATIONAL CONFERENCE ON SERVICE OPERATIONS AND LOGISTICS, AND INFORMATICS (SOLI), 2013, : 334 - 339
  • [26] Genetic Support Vector Classification and Feature Selection
    Mejia-Guevaara, Ivan
    Kuri-Morales, Angel
    PROCEEDINGS OF THE SPECIAL SESSION OF THE SEVENTH MEXICAN INTERNATIONAL CONFERENCE ON ARTIFICIAL INTELLIGENCE - MICAI 2008, 2008, : 75 - +
  • [27] A multiple kernel support vector machine scheme for simultaneous feature selection and rule-based classification
    Chen, Zhenyu
    Li, Jianping
    ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING, PROCEEDINGS, 2007, 4426 : 441 - +
  • [28] Support Vector Machine-Based Classification of Rock Texture Images Aided by Efficient Feature Selection
    Shang, Changjing
    Barnes, Dave
    2012 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), 2012,
  • [29] Twitter Feature Selection and Classification Using Support Vector Machine for Aspect-Based Sentiment Analysis
    Zainuddin, Nurulhuda
    Selamat, Ali
    Ibrahim, Roliana
    TRENDS IN APPLIED KNOWLEDGE-BASED SYSTEMS AND DATA SCIENCE, 2016, 9799 : 269 - 279
  • [30] Sparse Support Vector Machine for Simultaneous Feature Selection and Classification in Motor-Imagery-Based BCI
    Zhang, Yu
    Wang, Yu
    Jin, Jing
    Wang, Xingyu
    ADVANCES IN COGNITIVE NEURODYNAMICS (V), 2016, : 363 - 369