Point-of-Care PCR Assays for COVID-19 Detection

被引:82
作者
Gupta, Niharika [1 ]
Augustine, Shine [1 ]
Narayan, Tarun [2 ]
O'Riordan, Alan [2 ]
Das, Asmita [1 ]
Kumar, D. [3 ]
Luong, John H. T. [4 ]
Malhotra, Bansi D. [1 ]
机构
[1] Delhi Technol Univ, Dept Biotechnol, Delhi 110042, India
[2] Univ Coll Cork, Tyndall Natl Inst, Nanotechnol Grp, Cork T12 K8AF, Ireland
[3] Delhi Technol Univ, Dept Appl Chem, New Delhi 110042, India
[4] Univ Coll Cork, Sch Chem, Cork T12 K8AF, Ireland
来源
BIOSENSORS-BASEL | 2021年 / 11卷 / 05期
基金
欧盟地平线“2020”;
关键词
polymerase chain reaction; COVID-19; electrochemical; digital PCR; point-of-care; DIAGNOSIS;
D O I
10.3390/bios11050141
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Molecular diagnostics has been the front runner in the world's response to the COVID-19 pandemic. Particularly, reverse transcriptase-polymerase chain reaction (RT-PCR) and the quantitative variant (qRT-PCR) have been the gold standard for COVID-19 diagnosis. However, faster antigen tests and other point-of-care (POC) devices have also played a significant role in containing the spread of SARS-CoV-2 by facilitating mass screening and delivering results in less time. Thus, despite the higher sensitivity and specificity of the RT-PCR assays, the impact of POC tests cannot be ignored. As a consequence, there has been an increased interest in the development of miniaturized, high-throughput, and automated PCR systems, many of which can be used at point-of-care. This review summarizes the recent advances in the development of miniaturized PCR systems with an emphasis on COVID-19 detection. The distinct features of digital PCR and electrochemical PCR are detailed along with the challenges. The potential of CRISPR/Cas technology for POC diagnostics is also highlighted. Commercial RT-PCR POC systems approved by various agencies for COVID-19 detection are discussed.
引用
收藏
页数:12
相关论文
共 60 条
[1]   Rapid, Ultrasensitive, and Quantitative Detection of SARS-CoV-2 Using Antisense Oligonucleotides Directed Electrochemical Biosensor Chip [J].
Alafeef, Maha ;
Dighe, Ketan ;
Moitra, Parikshit ;
Pan, Dipanjan .
ACS NANO, 2020, 14 (12) :17028-17045
[2]   Detection and quantification of SARS-CoV-2 by droplet digital PCR in real-time PCR negative nasopharyngeal swabs from suspected COVID-19 patients [J].
Alteri, Claudia ;
Cento, Valeria ;
Antonello, Maria ;
Colagrossi, Luna ;
Merli, Marco ;
Ughi, Nicola ;
Renica, Silvia ;
Matarazzo, Elisa ;
Di Ruscio, Federica ;
Tartaglione, Livia ;
Colombo, Jacopo ;
Grimaldi, Chiara ;
Carta, Stefania ;
Nava, Alice ;
Costabile, Valentino ;
Baiguera, Chiara ;
Campisi, Daniela ;
Fanti, Diana ;
Vismara, Chiara ;
Fumagalli, Roberto ;
Scaglione, Francesco ;
Epis, Oscar Massimiliano ;
Puoti, Massimo ;
Perno, Carlo Federico .
PLOS ONE, 2020, 15 (09)
[3]  
[Anonymous], 2021, COVID-19 weekly epidemiological update
[4]  
[Anonymous], 2020, EPLEX SARS COV 2 TES
[5]  
[Anonymous], 2021, ACCULA SARS COV 2 TE
[6]   False-negative results of initial RT-PCR assays for COVID-19: A systematic review [J].
Arevalo-Rodriguez, Ingrid ;
Buitrago-Garcia, Diana ;
Simancas-Racines, Daniel ;
Zambrano-Achig, Paula ;
Del Campo, Rosa ;
Ciapponi, Agustin ;
Sued, Omar ;
Martinez-Garcia, Laura ;
Rutjes, Anne W. ;
Low, Nicola ;
Bossuyt, Patrick M. ;
Perez-Molina, Jose A. ;
Zamora, Javier .
PLOS ONE, 2020, 15 (12)
[7]  
Arnaout Ramy, 2020, bioRxiv, DOI 10.1101/2020.06.02.131144
[8]  
Azhar M., 2020, BIORXIV
[9]   Performance of Severe Acute Respiratory Syndrome Coronavirus 2 Real-Time RT-PCR Tests on Oral Rinses and Saliva Samples [J].
Babady, N. Esther ;
McMillen, Tracy ;
Jani, Krupa ;
Viale, Agnes ;
Robilotti, Elizabeth V. ;
Aslam, Anoshe ;
Diver, Maureen ;
Sokoli, Desiree ;
Mason, Greg ;
Shah, Monika K. ;
Korenstein, Deborah ;
Kamboj, Mini .
JOURNAL OF MOLECULAR DIAGNOSTICS, 2021, 23 (01) :3-9
[10]   Performance of Abbott ID Now COVID-19 Rapid Nucleic Acid Amplification Test Using Nasopharyngeal Swabs Transported in Viral Transport Media and Dry Nasal Swabs in a New York City Academic Institution [J].
Basu, Atreyee ;
Zinger, Tatyana ;
Inglima, Kenneth ;
Woo, Kar-Mun ;
Atie, Onome ;
Yurasits, Lauren ;
See, Benjamin ;
Aguero-Rosenfeld, Maria E. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2020, 58 (08)