Legacy effects of soil moisture on microbial community structure and N2O emissions

被引:191
作者
Banerjee, Samiran [1 ]
Helgason, Bobbi [2 ]
Wang, Lianfeng [3 ]
Winsley, Tristrom [4 ]
Ferrari, Belinda C. [4 ]
Siciliano, Steven D. [5 ]
机构
[1] CSIRO, Agr, Canberra, ACT, Australia
[2] Agr & Agri Food Canada, Saskatoon, SK, Canada
[3] Dalian Jiaotong Univ, Coll Environm & Chem Engn, Dalian 116028, Peoples R China
[4] UNSW Australia, Sydney, NSW, Australia
[5] Univ Saskatchewan, Dept Soil Sci, Saskatoon, SK S7N 0W0, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
Previous soil moisture; Microbial community composition; Nitrous oxide; Transcript abundance; Pyrosequencing; BACTERIAL DIVERSITY; ABUNDANCE; DENITRIFICATION; MINERALIZATION; NITRIFICATION; NITRIFIER; AMMONIUM; DROUGHT; NITRATE; GENES;
D O I
10.1016/j.soilbio.2015.12.004
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
Soil moisture is a strong determinant of microbial activity exerting dominant control over gaseous and liquid diffusion rates and affecting O-2 and substrate availability. Often, measures of microbial community structure and soil moisture status fail to inform our understanding of soil processes, particularly those that are governed by complex feedbacks between substrate availability and environmental conditions (e.g. nitrogen transformations). Nitrous oxide (N2O) emissions, although conceptually regulated by soil moisture, are notoriously difficult to predict based on soil water content and nutrient status. Here, we studied agricultural soils under wetting, drying, and static moisture conditions to assess the impact of current and previous moisture on bacterial 16S rRNA composition; transcription of amoA, hao, norB, and nosZ; and net N2O production. Microbial community composition was dependent on previous moisture. As soils dried, bacterial rRNA contained fewer and more evenly distributed genera. We hypothesize that this was linked to the evenness of resource distribution as controlled by differences in substrate diffusion in wetting vs. drying conditions. N2O flux depended on previous, as well as current, soil moisture status and this legacy effect was greatest at 80% water filled pore space. Overall, we found that previous moisture affected microbial activity, transcription, composition and ultimately, N2O emissions. Our study demonstrates that, for soil microorganisms and processes, it is not only what soil moisture is, but also what it was that is important. (C) 2015 Elsevier Ltd. All rights reserved.
引用
收藏
页码:40 / 50
页数:11
相关论文
共 42 条
[1]   Soil environmental conditions rather than denitrifier abundance and diversity drive potential denitrification after changes in land uses [J].
Attard, E. ;
Recous, S. ;
Chabbi, A. ;
De Berranger, C. ;
Guillaumaud, N. ;
Labreuche, J. ;
Philippot, L. ;
Schmid, B. ;
Le Roux, X. .
GLOBAL CHANGE BIOLOGY, 2011, 17 (05) :1975-1989
[2]   Spatially tripartite interactions of denitrifiers in arctic ecosystems: activities, functional groups and soil resources [J].
Banerjee, Samiran ;
Siciliano, Steven D. .
ENVIRONMENTAL MICROBIOLOGY, 2012, 14 (09) :2601-2613
[3]   Responses of soil bacterial and fungal communities to extreme desiccation and rewetting [J].
Barnard, Romain L. ;
Osborne, Catherine A. ;
Firestone, Mary K. .
ISME JOURNAL, 2013, 7 (11) :2229-2241
[4]   Land use effects on gross nitrogen mineralization, nitrification, and N2O emissions in ephemeral wetlands [J].
Bedard-Haughn, Angela ;
Matson, Amanda L. ;
Pennock, Dan J. .
SOIL BIOLOGY & BIOCHEMISTRY, 2006, 38 (12) :3398-3406
[5]   Soil physics meets soil biology: Towards better mechanistic prediction of greenhouse gas emissions from soil [J].
Blagodatsky, Sergey ;
Smith, Pete .
SOIL BIOLOGY & BIOCHEMISTRY, 2012, 47 :78-92
[6]   Reappraisal of drying and wetting effects on C and N mineralization and fluxes in soils [J].
Borken, Werner ;
Matzner, Egbert .
GLOBAL CHANGE BIOLOGY, 2009, 15 (04) :808-824
[7]   Microbial immobilization of ammonium and nitrate in relation to ammonification and nitrification rates in organic and conventional cropping systems [J].
Burger, M ;
Jackson, LE .
SOIL BIOLOGY & BIOCHEMISTRY, 2003, 35 (01) :29-36
[8]   Low Pore Connectivity Increases Bacterial Diversity in Soil [J].
Carson, Jennifer K. ;
Gonzalez-Quinones, Vanesa ;
Murphy, Daniel V. ;
Hinz, Christoph ;
Shaw, Jeremy A. ;
Gleeson, Deirdre B. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (12) :3936-3942
[9]   Legacy effects of drought on plant growth and the soil food web [J].
de Vries, Franciska Trijntje ;
Liiri, Mira E. ;
Bjornlund, Lisa ;
Setala, Heikki M. ;
Christensen, Soren ;
Bardgett, Richard D. .
OECOLOGIA, 2012, 170 (03) :821-833
[10]   Relationship Between Soil Properties and Patterns of Bacterial β-diversity Across Reclaimed and Natural Boreal Forest Soils [J].
Dimitriu, Pedro A. ;
Grayston, Susan J. .
MICROBIAL ECOLOGY, 2010, 59 (03) :563-573