The complete mitochondrial genome of Hylarana latouchii (Anura: Ranidae) and its phylogenetic analysis

被引:2
作者
Sun, Yi-Jia [1 ]
Zheng, Yue-Yue [1 ]
Zheng, Wei-Cheng [2 ]
Lin, Zhi-Hua [1 ]
Qiao, Fen [1 ]
机构
[1] Lishui Univ, Lab Amphibian Divers Investigat, Coll Ecol, Lishui 323000, Zhejiang, Peoples R China
[2] Jiulongshan Natl Nat Reserve, Adm Bur Zhejiang, Suichang, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 07期
基金
中国国家自然科学基金;
关键词
Hylarana latouchii (Boulenger; 1899); mitochondrial genome; phylogenetic analysis; next-generation sequencing;
D O I
10.1080/23802359.2021.1942260
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We reported the complete mitochondrial genome (mitogenome) of broad-folded frog (Hylarana latouchii). This mitogenome is 17,007 bp in size and consists of 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs, and one non-coding sequence (D-loop). The total composition was 58.54% A + T and 41.46% G + C (T: 29.31%, C: 27.33%, A: 29.23%, and G: 14.13%). The phylogenetic analysis revealed that H. latouchii formed a clade with other two species of genus Hylarana. This mitogenomic sequence of H. latouchii provides useful data to study its population genetics and phylogeography.
引用
收藏
页码:2082 / 2083
页数:2
相关论文
共 8 条
[1]  
Amphibia China, 2021, DAT CHIN AMPH
[2]   MITOS: Improved de novo metazoan mitochondrial genome annotation [J].
Bernt, Matthias ;
Donath, Alexander ;
Juehling, Frank ;
Externbrink, Fabian ;
Florentz, Catherine ;
Fritzsch, Guido ;
Puetz, Joern ;
Middendorf, Martin ;
Stadler, Peter F. .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 69 (02) :313-319
[3]   NOVOPlasty: de novo assembly of organelle genomes from whole genome data [J].
Dierckxsens, Nicolas ;
Mardulyn, Patrick ;
Smits, Guillaume .
NUCLEIC ACIDS RESEARCH, 2017, 45 (04)
[4]   Characterization of complete mitochondrial genome of Hylarana guentheri (Anura: Ranidae) and its phylogenetic implication [J].
Jiang, Lichun ;
Wu, Bingxiu ;
Luo, Jing ;
Xu, Zhongwen ;
Huang, Nenghao .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01) :616-618
[5]   tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes [J].
Lowe, Todd M. ;
Chan, Patricia P. .
NUCLEIC ACIDS RESEARCH, 2016, 44 (W1) :W54-W57
[6]   Systematics and biogeography of the Hylarana frog (Anura: Ranidae) radiation across tropical Australasia, Southeast Asia, and Africa [J].
Oliver, Lauren A. ;
Prendini, Elizabeth ;
Kraus, Fred ;
Raxworthy, Christopher J. .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2015, 90 :176-192
[7]   MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space [J].
Ronquist, Fredrik ;
Teslenko, Maxim ;
van der Mark, Paul ;
Ayres, Daniel L. ;
Darling, Aaron ;
Hohna, Sebastian ;
Larget, Bret ;
Liu, Liang ;
Suchard, Marc A. ;
Huelsenbeck, John P. .
SYSTEMATIC BIOLOGY, 2012, 61 (03) :539-542
[8]   The mitochondrial genome of broad-folded frog (Hylarana latouthii) [J].
Xiao, Yu ;
Xia, Yun ;
Zeng, Xiaomao .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02) :3018-3019