Structure of the human PKD1-PKD2 complex

被引:190
作者
Su, Qiang [1 ]
Hu, Feizhuo [1 ]
Ge, Xiaofei [1 ]
Lei, Jianlin [2 ]
Yu, Shengqiang [3 ]
Wang, Tingliang [1 ,4 ]
Zhou, Qiang [1 ]
Mei, Chianglin [3 ]
Shi, Yigong [1 ,4 ]
机构
[1] Tsinghua Univ, Beijing Adv Innovat Ctr Struct Biol, Tsinghua Peking Joint Ctr Life Sci, Sch Med,Sch Life Sci, Beijing 100084, Peoples R China
[2] Tsinghua Univ, Minist Educ Key Lab Prot Sci, Technol Ctr Prot Sci, Sch Life Sci, Beijing 100084, Peoples R China
[3] Second Mil Med Univ, Changzheng Hosp, Dept Nephrol, Shanghai 200433, Peoples R China
[4] Westlake Univ, Inst Biol, Westlake Inst Adv Study, 18 Shilongshan Rd, Hangzhou 310064, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
POLYCYSTIC KIDNEY-DISEASE; PKD2; MUTATIONS; PRIMARY CILIA; CHANNEL; PROTEIN; DOMAIN; GENE; IDENTIFICATION; EXPRESSION; INSIGHTS;
D O I
10.1126/science.aat9819
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Mutations in two genes, PKD1 and PKD2, account for most cases of autosomal dominant polycystic kidney disease, one of the most common monogenetic disorders. Here we report the 3.6-angstrom cryo-electron microscopy structure of truncated human PKD1-PKD2 complex assembled in a 1: 3 ratio. PKD1 contains a voltage-gated ion channel (VGIC) fold that interacts with PKD2 to form the domain-swapped, yet noncanonical, transient receptor potential (TRP) channel architecture. The S6 helix in PKD1 is broken in the middle, with the extracellular half, S6a, resembling pore helix 1 in a typical TRP channel. Three positively charged, cavity-facing residues on S6b may block cation permeation. In addition to the VGIC, a five-transmembrane helix domain and a cytosolic PLAT domain were resolved in PKD1. The PKD1-PKD2 complex structure establishes a framework for dissecting the function and disease mechanisms of the PKD proteins.
引用
收藏
页码:992 / +
页数:8
相关论文
共 71 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]  
Aguiari G, 2000, Hum Mutat, V16, P444, DOI 10.1002/1098-1004(200011)16:5<444::AID-HUMU11>3.0.CO
[3]  
2-C
[4]  
Alexander Nathan, 2011, IEEE Int Conf Comput Adv Bio Med Sci, V2011, P13, DOI 10.1109/ICCABS.2011.5729867
[5]   The N-terminal extracellular domain is required for polycystin-1-dependent channel activity [J].
Babich, V ;
Zeng, WZ ;
Yeh, BI ;
Ibraghimov-Beskrovanaya, O ;
Cai, YQ ;
Somlo, S ;
Huang, CL .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (24) :25582-25589
[6]   High Resolution Melt analysis for mutation screening in PKD1 and PKD2 [J].
Bataille, Stanislas ;
Berland, Yvon ;
Fontes, Michel ;
Burtey, Stephane .
BMC NEPHROLOGY, 2011, 12
[7]   The PLAT domain: a new piece in the PKD1 puzzle [J].
Bateman, A ;
Sandford, R .
CURRENT BIOLOGY, 1999, 9 (16) :R588-R590
[8]   The structure of a PKD domain from polycystin-1: Implications for polycystic kidney disease [J].
Bycroft, M ;
Bateman, A ;
Clarke, J ;
Hamill, SJ ;
Sandford, R ;
Thomas, RL ;
Chothia, C .
EMBO JOURNAL, 1999, 18 (02) :297-305
[9]   Altered trafficking and stability of polycystins underlie polycystic kidney disease [J].
Cai, Yiqiang ;
Fedeles, Sorin V. ;
Dong, Ke ;
Anyatonwu, Georgia ;
Onoe, Tamehito ;
Mitobe, Michihiro ;
Gao, Jian-Dong ;
Okuhara, Dayne ;
Tian, Xin ;
Gallagher, Anna-Rachel ;
Tang, Zhangui ;
Xie, Xiaoli ;
Lalioti, Maria D. ;
Lee, Ann-Hwee ;
Ehrlich, Barbara E. ;
Somlo, Stefan .
JOURNAL OF CLINICAL INVESTIGATION, 2014, 124 (12) :5129-5144
[10]   Forty Years of Sodium Channels: Structure, Function, Pharmacology, and Epilepsy [J].
Catterall, William A. .
NEUROCHEMICAL RESEARCH, 2017, 42 (09) :2495-2504