In vitro binding interaction of atorvastatin with calf thymus DNA: multispectroscopic, gel electrophoresis and molecular docking studies

被引:48
|
作者
Mirzaei-Kalar, Zeinab [1 ,2 ]
机构
[1] SUAT, Dept Mat Engn & Nanotechnol, Namin, Iran
[2] Univ Mohaghegh Ardabili, Dept Adv Technol, Namin, Ardabil, Iran
关键词
Atorvastatin; DNA interaction; Fluorescence study; Groove binding; Molecular docking; DNA cleavage; HUMAN SERUM-ALBUMIN; DEOXYRIBONUCLEIC-ACID; DRUG; COMPLEXES; CLEAVAGE; CARCINOGENESIS; INTERCALATION; ANTIOXIDANT; COPPER(II); STABILITY;
D O I
10.1016/j.jpba.2018.08.033
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
The interaction of atorvastatin with calf thymus DNA (CT-DNA) was investigated in vitro under simulated physiological conditions by using absorption and emission spectroscopy, viscosity measurements, gel electrophoresis and molecular docking studies. Analysis of UV-vis absorbance spectra indicates the formation of complex between atorvastatin and CT-DNA, and obtained binding constant (K-b = 8.2 x 10(4) L.mol(-1)) is comparable to groove binder drugs. Slight increase of viscosity of CT-DNA demonstrated the groove binding mode. Hoechst 33,258 and methylene blue (MB) displacement studies further confirmed such mode of atorvastatin interaction. Thermodynamic parameters Delta G, Delta H, and Delta S measurements were taken at different temperatures indicated that hydrophobic forces played main role in the binding process. Molecular docking provided detailed computational interaction of atorvastatin with CT-DNA which proved that atorvastatin binds to the groove of CT-DNA. Cleavage experiments showed that atorvastatin does not induce any cleavage under the experimental setup. Finally, all results indicated that atorvastatin interacts with CT-DNA via groove binding mode. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:101 / 109
页数:9
相关论文
共 50 条
  • [31] In vitro interaction of cefotaxime with calf thymus DNA: Insights from spectroscopic, calorimetric and molecular modelling studies
    Abul Qais, Faizan
    Ahmad, Iqbal
    JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 2018, 149 : 193 - 205
  • [32] Studies on the interaction of isoxazolcurcumin with calf thymus DNA
    Bera, Rabindranath
    Sahoo, Bijaya K.
    Ghosh, Kalyan S.
    Dasgupta, Swagata
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2008, 42 (01) : 14 - 21
  • [33] Binding of Bisphenol-F, a bisphenol analogue, to calf thymus DNA by multi-spectroscopic and molecular docking studies
    Usman, Afia
    Ahmad, Masood
    CHEMOSPHERE, 2017, 181 : 536 - 543
  • [34] Groove binding between ferulic acid and calf thymus DNA: spectroscopic methodology combined with chemometrics and molecular docking studies
    Zhang, Guowen
    Zhou, Zhisheng
    Xu, Jianjian
    Liao, Yijing
    Hu, Xing
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2020, 38 (07): : 2029 - 2037
  • [35] Exploring the binding mode of donepezil with calf thymus DNA using spectroscopic and molecular docking methods
    Guo, Hui
    Xie, Jiawen
    Liao, Tancong
    Tuo, Xun
    LUMINESCENCE, 2021, 36 (01) : 35 - 44
  • [36] Molecular docking and spectroscopic studies on the interaction of new fifth-generation antibacterial drug ceftobiprole with calf thymus DNA
    Shahabadi, Nahid
    Fili, Soraya Moradi
    Maghsudi, Maryam
    NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 2019, 38 (10): : 732 - 751
  • [37] IN VITRO INTERACTION OF LSD WITH PURIFIED CALF THYMUS DNA
    WAGNER, TE
    NATURE, 1969, 222 (5199) : 1170 - &
  • [38] Binding properties of pendimethalin herbicide to DNA: multispectroscopic and molecular docking approaches
    Ahmad, Irshad
    Ahmad, Ajaz
    Ahmad, Masood
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2016, 18 (09) : 6476 - 6485
  • [39] Interaction of vasicine with calf thymus DNA: Molecular docking, spectroscopic and differential scanning calorimetric insights
    Murali, Sai R. S.
    Siddhardha, Sai R. S.
    Babu, Rajesh D.
    Venketesh, S.
    Basavaraju, R.
    Rao, Nageswara G.
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2017, 180 : 217 - 223
  • [40] Study on the interaction of the drug mesalamine with calf thymus DNA using molecular docking and spectroscopic techniques
    Shahabadi, Nahid
    Fili, Soraya Moradi
    Kheirdoosh, Fahimeh
    JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY, 2013, 128 : 20 - 26