sAOP: linking chemical stressors to adverse outcomes pathway networks

被引:20
作者
Aguayo-Orozco, Alejandro [1 ]
Audouze, Karine [2 ]
Siggaard, Troels [1 ]
Barouki, Robert [2 ]
Brunak, Soren [1 ]
Taboureau, Olivier [1 ,3 ]
机构
[1] Univ Copenhagen, Fac Hlth & Med Sci, Novo Nordisk Fdn Ctr Prot Res, DK-2200 Copenhagen, Denmark
[2] Univ Paris, Environm Tox Therapeut Targets Cellular Signaling, INSERM, UMR S 1124, F-75006 Paris, France
[3] Univ Paris, Computat Modeling Prot Ligand Interact Grp, Unit Funct & Adapt Biol, INSERM,U1133,CNRS,UMR 8251, F-75013 Paris, France
基金
欧盟地平线“2020”;
关键词
D O I
10.1093/bioinformatics/btz570
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Motivation: Adverse outcome pathway (AOP) is a toxicological concept proposed to provide a mechanistic representation of biological perturbation over different layers of biological organization. Although AOPs are by definition chemical-agnostic, many chemical stressors can putatively interfere with one or several AOPs and such information would be relevant for regulatory decision-making. Results: With the recent development of AOPs networks aiming to facilitate the identification of interactions among AOPs, we developed a stressor-AOP network (sAOP). Using the 'cytotoxitiy burst' (CTB) approach, we mapped bioactive compounds from the ToxCast data to a list of AOPs reported in AOP-Wiki database. With this analysis, a variety of relevant connections between chemicals and AOP components can be identified suggesting multiple effects not observed in the simplified 'one-biological perturbation to one-adverse outcome' model. The results may assist in the prioritization of chemicals to assess risk-based evaluations in the context of human health.
引用
收藏
页码:5391 / 5392
页数:2
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