Acinetobacter baumannii K106 and K112: Two Structurally and Genetically Related 6-Deoxy-l-talose-Containing Capsular Polysaccharides

被引:10
作者
Kasimova, Anastasiya A. [1 ]
Arbatsky, Nikolay P. [1 ]
Tickner, Jacob [2 ]
Kenyon, Johanna J. [2 ]
Hall, Ruth M. [3 ]
Shneider, Michael M. [4 ]
Dzhaparova, Alina A. [1 ,6 ]
Shashkov, Alexander S. [1 ]
Chizhov, Alexander O. [1 ]
Popova, Anastasiya V. [5 ]
Knirel, Yuriy A. [1 ]
机构
[1] Russian Acad Sci, ND Zelinsky Inst Organ Chem, Moscow 119991, Russia
[2] Queensland Univ Technol, Sch Biomed Sci, Fac Hlth, Ctr Immunol & Infect Control, Brisbane, Qld 4059, Australia
[3] Univ Sydney, Sch Life & Environm Sci, Sydney, NSW 2006, Australia
[4] Russian Acad Sci, MM Shemyakin & Yu A Ovchinnikov Inst Bioorgan Che, Moscow 117997, Russia
[5] State Res Ctr Appl Microbiol & Biotechnol, Obolensk 142279, Moscow Region, Russia
[6] Pusan Natl Univ, Coll Nat Resources & Life Sci, Pusan 46241, South Korea
基金
俄罗斯科学基金会; 澳大利亚研究理事会;
关键词
Acinetobacter baumannii; capsular polysaccharide; K locus; K106; K112; 6-deoxy-l-talose; ACID; ISOLATE;
D O I
10.3390/ijms22115641
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Whole genome sequences of two Acinetobacter baumannii clinical isolates, 48-1789 and MAR24, revealed that they carry the KL106 and KL112 capsular polysaccharide (CPS) biosynthesis gene clusters, respectively, at the chromosomal K locus. The KL106 and KL112 gene clusters are related to the previously described KL11 and KL83 gene clusters, sharing genes for the synthesis of l-rhamnose (l-Rhap) and 6-deoxy-l-talose (l-6dTalp). CPS material isolated from 48-1789 and MAR24 was studied by sugar analysis and Smith degradation along with one- and two-dimensional 1H and 13C NMR spectroscopy. The structures of K106 and K112 oligosaccharide repeats (K units) l-6dTalp-(1 -> 3)-D-GlcpNAc tetrasaccharide fragment share the responsible genes in the respective gene clusters. The K106 and K83 CPSs also have the same linkage between K units. The KL112 cluster includes an additional glycosyltransferase gene, Gtr183, and the K112 unit includes alpha l-Rhap side chain that is not found in the K106 structure. K112 further differs in the linkage between K units formed by the Wzy polymerase, and a different wzy gene is found in KL112. However, though both KL106 and KL112 share the atr8 acetyltransferase gene with KL83, only K83 is acetylated.
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页数:13
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共 23 条
[1]   K units of the K8 and K54 capsular polysaccharides produced by Acinetobacter baumannii BAL 097 and RCH52 have the same structure but contain different di-N-acyl derivatives of legionaminic acid and are linked differently [J].
Arbatsky, Nikolay P. ;
Kenyon, Johanna J. ;
Kasimova, Anastasiya A. ;
Shashkov, Alexander S. ;
Shneider, Mikhail M. ;
Popova, Anastasiya, V ;
Knirel, Yuriy A. ;
Hallg, Ruth M. .
CARBOHYDRATE RESEARCH, 2019, 483
[2]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[3]   Elucidation of the K32 Capsular Polysaccharide Structure and Characterization of the KL32 Gene Cluster of Acinetobacter baumannii LUH5549 [J].
Cahill, S. M. ;
Arbatsky, N. P. ;
Shashkov, A. S. ;
Shneider, M. M. ;
Popova, A. V. ;
Hall, R. M. ;
Kenyon, J. J. ;
Knirel, Y. A. .
BIOCHEMISTRY-MOSCOW, 2020, 85 (02) :241-247
[4]   The UDP-GalNAcA biosynthesis genes gna-gne2 are required to maintain cell envelope integrity and in vivo fitness in multi-drug resistant Acinetobacter baumannii [J].
Crepin, Sebastien ;
Ottosen, Elizabeth N. ;
Chandler, Courtney E. ;
Sintsova, Anna ;
Ernst, Robert K. ;
Mobley, Harry L. T. .
MOLECULAR MICROBIOLOGY, 2020, 113 (01) :153-172
[5]   Bacteriophage-resistant Acinetobacter baumannii are resensitized to antimicrobials [J].
Gordillo Altamirano, Fernando ;
Forsyth, John H. ;
Patwa, Ruzeen ;
Kostoulias, Xenia ;
Trim, Michael ;
Subedi, Dinesh ;
Archer, Stuart K. ;
Morris, Faye C. ;
Oliveira, Cody ;
Kielty, Luisa ;
Korneev, Denis ;
O'Bryan, Moira K. ;
Lithgow, Trevor J. ;
Peleg, Anton Y. ;
Barr, Jeremy J. .
NATURE MICROBIOLOGY, 2021, 6 (02) :157-+
[6]   Acinetobacter strains carry two functional oligosaccharyltransferases, one devoted exclusively to type IV pilin, and the other one dedicated to O-glycosylation of multiple proteins [J].
Harding, Christian M. ;
Nasr, Mohamed A. ;
Kinsella, Rachel L. ;
Scott, Nichollas E. ;
Foster, Leonard J. ;
Weber, Brent S. ;
Fiester, Steve E. ;
Actis, Luis A. ;
Tracy, Erin N. ;
Munson, Robert S., Jr. ;
Feldman, Mario F. .
MOLECULAR MICROBIOLOGY, 2015, 96 (05) :1023-1041
[7]   Structure of the K82 Capsular Polysaccharide from Acinetobacter baumannii LUH5534 Containing a d-Galactose 4,6-Pyruvic Acid Acetal [J].
Kasimova, A. A. ;
Kenyon, J. J. ;
Arbatsky, N. P. ;
Shashkov, A. S. ;
Popova, A. V. ;
Knirel, Y. A. ;
Hall, R. M. .
BIOCHEMISTRY-MOSCOW, 2018, 83 (07) :831-835
[8]   K17 capsular polysaccharide produced by Acinetobacter baumannii isolate G7 contains an amide of 2-acetamido-2-deoxy-D-galacturonic acid with D-alanine [J].
Kenyon, Johanna J. ;
Senchenkova, Sofiya N. ;
Shashkov, Alexander S. ;
Shneider, Mikhail M. ;
Popova, Anastasia V. ;
Knirel, Yuriy A. ;
Hall, Ruth M. .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 144 :857-862
[9]   The K46 and K5 capsular polysaccharides produced by Acinetobacter baumannii NIPH 329 and SDF have related structures and the side-chain non-ulosonic acids are 4-O-acetylated by phage-encoded O-acetyltransferases [J].
Kenyon, Johanna J. ;
Arbatsky, Nikolay P. ;
Shneider, Mikhail M. ;
Popova, Anastasiya V. ;
Dmitrenok, Andrei S. ;
Kasimova, Anastasiya A. ;
Shashkov, Alexander S. ;
Hall, Ruth M. ;
Knirel, Yuriy A. .
PLOS ONE, 2019, 14 (06)
[10]   Acinetobacter baumannii isolate BAL_212 from Vietnam produces the K57 capsular polysaccharide containing a rarely occurring amino sugar N-acetylviosamine [J].
Kenyon, Johanna J. ;
Kasimova, Anastasiya A. ;
Shashkov, Alexander S. ;
Hall, Ruth M. ;
Knirel, Yuriy A. .
MICROBIOLOGY-SGM, 2018, 164 (02) :217-220