machine learning;
deep learning;
precision medicine;
NEURAL-NETWORKS;
DEEP;
HISTORY;
D O I:
10.1139/gen-2020-0131
中图分类号:
Q81 [生物工程学(生物技术)];
Q93 [微生物学];
学科分类号:
071005 ;
0836 ;
090102 ;
100705 ;
摘要:
Precision medicine is an emerging approach to clinical research and patient care that focuses on understanding and treating disease by integrating multi-modal or multi-omics data from an individual to make patient-tailored decisions. With the large and complex datasets generated using precision medicine diagnostic approaches, novel techniques to process and understand these complex data were needed. At the same time, computer science has progressed rapidly to develop techniques that enable the storage, processing, and analysis of these complex datasets, a feat that traditional statistics and early computing technologies could not accomplish. Machine learning, a branch of artificial intelligence, is a computer science methodology that aims to identify complex patterns in data that can be used to make predictions or classifications on new unseen data or for advanced exploratory data analysis. Machine learning analysis of precision medicine's multi-modal data allows for broad analysis of large datasets and ultimately a greater understanding of human health and disease. This review focuses on machine learning utilization for precision medicine's "big data", in the context of genetics, genomics, and beyond.
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Univ Chinese Acad Sci, Sch Pharm, 19 Yuquan Rd, Beijing 100049, Peoples R ChinaChinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Fan, Shijie
Chen, Yu
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机构:
Chinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Univ Chinese Acad Sci, Sch Pharm, 19 Yuquan Rd, Beijing 100049, Peoples R ChinaChinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Chen, Yu
Luo, Cheng
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机构:
Chinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Univ Chinese Acad Sci, Sch Pharm, 19 Yuquan Rd, Beijing 100049, Peoples R ChinaChinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
Luo, Cheng
Meng, Fanwang
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机构:
McMaster Univ, Dept Chem & Chem Biol, Hamilton, ON L8S 4M1, CanadaChinese Acad Sci, Shanghai Inst Mat Med, State Key Lab Drug Res, Drug Discovery & Design Ctr, Shanghai, Peoples R China
机构:
Natl Inst Cardiol Ignacio Chavez, Clin Res Div, Mexico City, DF, MexicoNatl Inst Cardiol Ignacio Chavez, Clin Res Div, Mexico City, DF, Mexico
Martinez-Garcia, Mireya
Hernandez-Lemus, Enrique
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h-index: 0
机构:
Natl Inst Gen Med INMEGEN, Computat Gen Div, Mexico City, DF, Mexico
Univ Nacl Autnoma Mexico, Ctr Complex Sci, Mexico City, DF, MexicoNatl Inst Cardiol Ignacio Chavez, Clin Res Div, Mexico City, DF, Mexico
机构:
Univ Helsinki, Fac Med, Res Program Syst Oncol, Helsinki, Finland
Univ Helsinki, Dept Pathol, Helsinki, Finland
Univ Turku, Inst Biomed Pathol, Turku, FinlandUniv Helsinki, Fac Med, Res Program Syst Oncol, Helsinki, Finland
Almangush, Alhadi
Elmusrati, Mohammed
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机构:
Univ Vaasa, Sch Technol & Innovat, Dept Ind Digitalizat, Vaasa, FinlandUniv Helsinki, Fac Med, Res Program Syst Oncol, Helsinki, Finland
Elmusrati, Mohammed
Maekitie, Antti A.
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机构:
Univ Helsinki, Fac Med, Res Program Syst Oncol, Helsinki, Finland
Univ Helsinki, Helsinki Univ Hosp, Dept Otorhinolaryngol Head & Neck Surg, Helsinki, Finland
Helsinki Univ Hosp, Helsinki, Finland
Karolinska Inst, Div Ear Nose & Throat Dis, Dept Clin Sci Intervent &Technol, Stockholm, Sweden
Karolinska Univ Hosp, Stockholm, SwedenUniv Helsinki, Fac Med, Res Program Syst Oncol, Helsinki, Finland
机构:
Collect Hlth, Res & Analyt, San Francisco, CA USA
Harvard Med Sch, Ctr Primary Care, Boston, MA 02115 USA
Imperial Coll London, Sch Publ Hlth, London, EnglandCollect Hlth, Res & Analyt, San Francisco, CA USA
Basu, Sanjay
Faghmous, James H.
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h-index: 0
机构:Collect Hlth, Res & Analyt, San Francisco, CA USA
Faghmous, James H.
Doupe, Patrick
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h-index: 0
机构:
Zalando ES, Berlin, GermanyCollect Hlth, Res & Analyt, San Francisco, CA USA