A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies

被引:33
作者
Coletti, Pietro [1 ]
Libin, Pieter [1 ,2 ,3 ]
Petrof, Oana [1 ]
Willem, Lander [4 ]
Abrams, Steven [1 ,5 ]
Herzog, Sereina A. [4 ,6 ]
Faes, Christel [1 ]
Kuylen, Elise [1 ,4 ]
Wambua, James [1 ]
Beutels, Philippe [4 ,7 ]
Hens, Niel [1 ,4 ]
机构
[1] Hasselt Univ, Data Sci Inst, I Biostat, Agoralaan Gebouw D, B-3590 Diepenbeek, Belgium
[2] Vrije Univ Brussel, Pl Laan 2, B-1050 Brussels, Belgium
[3] Katholieke Univ Leuven, Rega Inst Med Res, Herestr 49, B-3000 Leuven, Belgium
[4] Univ Antwerp, Vaccine & Infect Dis Inst, Ctr Hlth Econ Res & Modelling Infect Dis, Univ Pl 1, B-2610 Antwerp, Belgium
[5] Univ Antwerp, Global Hlth Inst, Family Med & Populat Hlth, Antwerp, Belgium
[6] Inst Med Informat Stat & Documentat, Auenbruggerpl 2, A-8036 Graz, Austria
[7] Univ New South Wales, Sch Publ Hlth & Community Med, Sydney, NSW, Australia
基金
欧洲研究理事会; 比利时弗兰德研究基金会;
关键词
COVID-19; Behavioral changes; Metapopulation; Epidemic modeling; Spatial transmission; Mixing patterns; TRANSMISSION;
D O I
10.1186/s12879-021-06092-w
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Background In response to the ongoing COVID-19 pandemic, several countries adopted measures of social distancing to a different degree. For many countries, after successfully curbing the initial wave, lockdown measures were gradually lifted. In Belgium, such relief started on May 4th with phase 1, followed by several subsequent phases over the next few weeks. Methods We analysed the expected impact of relaxing stringent lockdown measures taken according to the phased Belgian exit strategy. We developed a stochastic, data-informed, meta-population model that accounts for mixing and mobility of the age-structured population of Belgium. The model is calibrated to daily hospitalization data and is able to reproduce the outbreak at the national level. We consider different scenarios for relieving the lockdown, quantified in terms of relative reductions in pre-pandemic social mixing and mobility. We validate our assumptions by making comparisons with social contact data collected during and after the lockdown. Results Our model is able to successfully describe the initial wave of COVID-19 in Belgium and identifies interactions during leisure/other activities as pivotal in the exit strategy. Indeed, we find a smaller impact of school re-openings as compared to restarting leisure activities and re-openings of work places. We also assess the impact of case isolation of new (suspected) infections, and find that it allows re-establishing relatively more social interactions while still ensuring epidemic control. Scenarios predicting a second wave of hospitalizations were not observed, suggesting that the per-contact probability of infection has changed with respect to the pre-lockdown period. Conclusions Contacts during leisure activities are found to be most influential, followed by professional contacts and school contacts, respectively, for an impending second wave of COVID-19. Regular re-assessment of social contacts in the population is therefore crucial to adjust to evolving behavioral changes that can affect epidemic diffusion.
引用
收藏
页数:12
相关论文
共 57 条
[41]   Reducing transmission of SARS-CoV-2 Masks and testing are necessary to combat asymptomatic spread in aerosols and droplets [J].
Prather, Kimberly A. ;
Wang, Chia C. ;
Schooley, Robert T. .
SCIENCE, 2020, 368 (6498) :1422-1424
[42]   The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study [J].
Prem, Kiesha ;
Liu, Yang ;
Russell, Timothy W. ;
Kucharski, Adam J. ;
Eggo, Rosalind M. ;
Davies, Nicholas ;
Jit, Mark ;
Klepac, Petra .
LANCET PUBLIC HEALTH, 2020, 5 (05) :E261-E270
[43]   Epidemiological characteristics of COVID-19 cases and estimates of the reproductive numbers 1 month into the epidemic, Italy, 28 January to 31 March 2020 [J].
Riccardo, Flavia ;
Ajelli, Marco ;
Andrianou, Xanthi D. ;
Bella, Antonino ;
Del Manso, Martina ;
Fabiani, Massimo ;
Bellino, Stefania ;
Boros, Stefano ;
Urdiales, Alberto Mateo ;
Marziano, Valentina ;
Rota, Maria Cristina ;
Filia, Antonietta ;
D'Ancona, Fortunato ;
Siddu, Andrea ;
Punzo, Ornella ;
Trentini, Filippo ;
Guzzetta, Giorgio ;
Poletti, Piero ;
Stefanelli, Paola ;
Castrucci, Maria Rita ;
Ciervo, Alessandra ;
Di Benedetto, Corrado ;
Tallon, Marco ;
Piccioli, Andrea ;
Brusaferro, Silvio ;
Rezza, Giovanni ;
Merler, Stefano ;
Pezzotti, Patrizio .
EUROSURVEILLANCE, 2020, 25 (49) :1-11
[44]  
Sciensano, 2020, COV 19 BELG EP SIT
[45]   Taking the Human Out of the Loop: A Review of Bayesian Optimization [J].
Shahriari, Bobak ;
Swersky, Kevin ;
Wang, Ziyu ;
Adams, Ryan P. ;
de Freitas, Nando .
PROCEEDINGS OF THE IEEE, 2016, 104 (01) :148-175
[46]  
StatBel, 2020, The belgian statistical office
[47]  
Stoye J., 2020, CRITICAL ASSESSMENT
[48]   A prospect on the use of antiviral drugs to control local outbreaks of COVID-19 [J].
Torneri, Andrea ;
Libin, Pieter ;
Vanderlocht, Joris ;
Vandamme, Anne-Mieke ;
Neyts, Johan ;
Hens, Niel .
BMC MEDICINE, 2020, 18 (01)
[49]   Close contact infection dynamics over time: insights from a second large-scale social contact survey in Flanders, Belgium, in 2010-2011 [J].
Van Hoang, Thang ;
Coletti, Pietro ;
Kiffe, Yimer Wasihun ;
Van Kerckhove, Kim ;
Vercruysse, Sarah ;
Willem, Lander ;
Beutels, Philippe ;
Hens, Niel .
BMC INFECTIOUS DISEASES, 2021, 21 (01)
[50]   The Impact of Illness on Social Networks: Implications for Transmission and Control of Influenza [J].
Van Kerckhove, Kim ;
Hens, Niel ;
Edmunds, W. John ;
Eames, Ken T. D. .
AMERICAN JOURNAL OF EPIDEMIOLOGY, 2013, 178 (11) :1655-1662