The evolving landscape of untargeted metabolomics

被引:47
|
作者
Di Minno, Alessandro [1 ,2 ]
Gelzo, Monica [2 ,3 ]
Stornaiuolo, Mariano [1 ]
Ruoppolo, Margherita [2 ,3 ]
Castaldo, Giuseppe [2 ,3 ]
机构
[1] Univ Napoli Federico II, Dipartimento Farm, I-80131 Naples, Italy
[2] CEINGE Biotecnol Avanzate, Naples, Italy
[3] Univ Napoli Federico II, Dipartimento Med Mol & Biotecnol Med, Naples, Italy
关键词
Metabolomics; Mass spectrometry; Pathophysiology; Laboratory medicine; LINKED-IMMUNOSORBENT-ASSAY; FALSE DISCOVERY RATE; METABOLITE IDENTIFICATION; MASS-SPECTROMETRY; DRUG DISCOVERY; BIOMARKERS; CANCER; OMICS; TOOL; NUTRITION;
D O I
10.1016/j.numecd.2021.01.008
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Aims: Untargeted Metabolomics is a "hypothesis-generating discovery strategy" that compares groups of samples (e.g., cases vs controls); identifies the metabolome and establishes (early signs of) perturbations. Targeted Metabolomics helped gather key information in life sciences and disclosed novel strategies for the treatment of major clinical entities (e.g., malignancy, cardiovascular diabetes mellitus, drug toxicity). Because of its relevance in biomarker discovery, attention is now devoted to improving the translational potential of untargeted Metabolomics. Data synthesis: Expertise in laboratory medicine and in bioinformatics helps solve challenges/pitfalls that may bias metabolite profiling in untargeted Metabolomics. Clinical validation (availability/reliability of analytical instruments) and profitability (how many people will use the test) are mandatory steps for potential biomarkers. Biomarkers to predict individual patient response, patient populations that will best respond to specific strategies and/or approaches for an optimal response to treatment are now being developed. Additional help is expected from professional, and regulatory Agencies as to guidelines for study design and data acquisition and analysis, to be applied from the very beginning of a project. Evidence from food, plant, human, environmental, and animal research argues for the need of miniaturized approaches that employ low-cost, easy to use, mobile devices. ELISA kits with such characteristics that employ targeted metabolites are already available. Conclusions: Improving knowledge of the mechanisms behind the disease status (pathophysiology) will help untargeted Metabolomics gather a direct positive impact on welfare and industrial advancements, and fade uncertainties perceived by regulators/payers and patients concerning variables related to miniaturised instruments and user-friendly software and databases. (c) 2021 Published by Elsevier B.V. on behalf of The Italian Diabetes Society, the Italian Society for the Study of Atherosclerosis, the Italian Society of Human Nutrition and the Department of Clinical Medicine and Surgery, Federico II University.
引用
收藏
页码:1645 / 1652
页数:8
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