Structural and genomic DNA analysis of the putative TetR transcriptional repressor SCO7518 from Streptomyces coelicolor A3(2)

被引:7
|
作者
Hayashi, Takeshi [1 ,2 ]
Tanaka, Yoshikazu [3 ]
Sakai, Naoki [3 ]
Okada, Ui [3 ]
Yao, Min [3 ,4 ]
Watanabe, Nobuhisa [3 ,4 ]
Tamura, Tomohiro [5 ]
Tanaka, Isao [3 ,4 ]
机构
[1] Beppu Univ, Fac Food & Nutr, Dept Food & Fermentat Sci, Beppu, Oita 8748501, Japan
[2] Beppu Univ, Grad Sch Food Sci & Nutr, Beppu, Oita 8748501, Japan
[3] Hokkaido Univ, Fac Adv Life Sci, Sapporo, Hokkaido 0600810, Japan
[4] Hokkaido Univ, Grad Sch Sci, Div Biol Sci, Sapporo, Hokkaido 0600810, Japan
[5] Natl Inst Adv Ind Sci & Technol, Bioprod Res Inst, Sapporo, Hokkaido 0628517, Japan
关键词
Actinomycete; TetR family; Transcriptional repressor; Helix-turn-helix; Genomic SELEX; CRYSTAL-MOUNTING METHOD; MULTIDRUG RECOGNITION; CHARGE NEUTRALIZATION; ESCHERICHIA-COLI; PROTEIN; QACR; SEQUENCE; BINDING; REFINEMENT; REGULATORS;
D O I
10.1016/j.febslet.2014.09.037
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
SCO7518 is a protein of unknown function from Streptomyces coelicolor A3(2) that has been classified into the TetR transcriptional regulator family. In this study, a crystal structure of SCO7518 was determined at 2.29 angstrom resolution. The structure is a homodimer of protomers that comprise an N-terminal DNA-binding domain and a C-terminal dimerization and regulatory domain, and possess a putative ligand-binding cavity. Genomic systematic evolution of ligands by exponential enrichment and electrophoretic mobility shift assays revealed that SCO7518 specifically binds to an operator sequence located upstream of the sco7519 gene, which encodes a maltose O-acetyltransferase. These results suggest that SCO7518 is a transcriptional repressor of sco7519 expression. (C) 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:4311 / 4318
页数:8
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