A structured interdomain linker directs self-polymerization of human uromodulin

被引:76
作者
Bokhove, Marcel [1 ,2 ]
Nishimura, Kaoru [1 ,2 ]
Brunati, Martina [3 ]
Han, Ling [1 ,2 ]
de Sanctis, Daniele [4 ]
Rampoldi, Luca [3 ]
Jovine, Luca [1 ,2 ]
机构
[1] Karolinska Inst, Dept Biosci & Nutr, SE-14183 Huddinge, Sweden
[2] Karolinska Inst, Ctr Innovat Med, SE-14183 Huddinge, Sweden
[3] Ist Sci San Raffaele, Div Genet & Cell Biol, Mol Genet Renal Disorders Unit, I-20132 Milan, Italy
[4] European Synchrotron Radiat Facil, F-38000 Grenoble, France
基金
瑞典研究理事会; 欧洲研究理事会;
关键词
uromodulin; ZP2; polymerization; zona pellucida domain; X-ray crystallography; TAMM-HORSFALL GLYCOPROTEIN; STRUCTURE REFINEMENT; DENSITY MODIFICATION; POSITIVE SELECTION; TECTORIAL MEMBRANE; ZP DOMAIN; PROTEIN; GENE; MUTATION; IDENTIFICATION;
D O I
10.1073/pnas.1519803113
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Uromodulin (UMOD)/Tamm-Horsfall protein, the most abundant human urinary protein, plays a key role in chronic kidney diseases and is a promising therapeutic target for hypertension. Via its bipartite zona pellucida module (ZP-N/ZP-C), UMOD forms extracellular filaments that regulate kidney electrolyte balance and innate immunity, as well as protect against renal stones. Moreover, salt-dependent aggregation of UMOD filaments in the urine generates a soluble molecular net that captures uropathogenic bacteria and facilitates their clearance. Despite the functional importance of its homopolymers, no structural information is available on UMOD and how it self-assembles into filaments. Here, we report the crystal structures of polymerization regions of human UMOD and mouse ZP2, an essential sperm receptor protein that is structurally related to UMOD but forms heteropolymers. The structure of UMOD reveals that an extensive hydrophobic interface mediates ZP-N domain homodimerization. This arrangement is required for filament formation and is directed by an ordered ZP-N/ZP-C linker that is not observed in ZP2 but is conserved in the sequence of deafness/Crohn's disease-associated homopolymeric glycoproteins a-tectorin (TECTA) and glycoprotein 2 (GP2). Our data provide an example of how interdomain linker plasticity can modulate the function of structurally similar multidomain proteins. Moreover, the architecture of UMOD rationalizes numerous pathogenic mutations in both UMOD and TECTA genes.
引用
收藏
页码:1552 / 1557
页数:6
相关论文
共 74 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   Towards automated crystallographic structure refinement with phenix.refine [J].
Afonine, Pavel V. ;
Grosse-Kunstleve, Ralf W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Moriarty, Nigel W. ;
Mustyakimov, Marat ;
Terwilliger, Thomas C. ;
Urzhumtsev, Alexandre ;
Zwart, Peter H. ;
Adams, Paul D. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2012, 68 :352-367
[3]   Privateer: software for the conformational validation of carbohydrate structures [J].
Agirre, Jon ;
Iglesias-Fernandez, Javier ;
Rovira, Carme ;
Davies, Gideon J. ;
Wilson, Keith S. ;
Cowtan, Kevin D. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2015, 22 (11) :833-834
[4]   A time- and cost-efficient system for high-level protein production in mammalian cells [J].
Aricescu, A. Radu ;
Lu, Weixian ;
Jones, E. Yvonne .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2006, 62 :1243-1250
[5]   A rare novel mutation in TECTA causes autosomal dominant nonsyndromic hearing loss in a Mongolian family [J].
Bai, Haihua ;
Yang, Xukui ;
Temuribagen ;
Guilan ;
Suyalatu ;
Narisu, Narisu ;
Wu, Huiguang ;
Chen, Yujie ;
Liu, Yangjian ;
Wu, Qizhu .
BMC MEDICAL GENETICS, 2014, 15
[6]   TEXshade:: shading and labeling of multiple sequence alignments using LATEX 2ε [J].
Beitz, E .
BIOINFORMATICS, 2000, 16 (02) :135-139
[7]   Structural characterization of native mouse zona pellucida proteins using mass spectrometry [J].
Boja, ES ;
Hoodbhoy, T ;
Fales, HM ;
Dean, J .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (36) :34189-34202
[8]   A LARGE DOMAIN COMMON TO SPERM RECEPTORS (ZP2 AND ZP3) AND TGF-BETA TYPE-III RECEPTOR [J].
BORK, P ;
SANDER, C .
FEBS LETTERS, 1992, 300 (03) :237-240
[9]   The serine protease hepsin mediates urinary secretion and polymerisation of Zona Pellucida domain protein uromodulin [J].
Brunati, Martina ;
Perucca, Simone ;
Han, Ling ;
Cattaneo, Angela ;
Consolato, Francesco ;
Andolfo, Annapaola ;
Schaeffer, Celine ;
Olinger, Eric ;
Peng, Jianhao ;
Santambrogio, Sara ;
Perrier, Romain ;
Li, Shuo ;
Bokhove, Marcel ;
Bachi, Angela ;
Hummler, Edith ;
Devuyst, Olivier ;
Wu, Qingyu ;
Jovine, Luca ;
Rampoldi, Luca .
ELIFE, 2015, 4
[10]   Crystallization of a trimeric human T cell leukemia virus type 1 gp21 ectodomain fragment as a chimera with maltose-binding protein [J].
Center, RJ ;
Kobe, B ;
Wilson, KA ;
Teh, T ;
Howlett, GJ ;
Kemp, BE ;
Poumbourios, P .
PROTEIN SCIENCE, 1998, 7 (07) :1612-1619