Genome-wide analysis reveals four key transcription factors associated with cadmium stress in creeping bentgrass (Agrostis stolonifera L.)

被引:28
作者
Yuan, Jianbo [1 ,2 ]
Bai, Yuqing [3 ]
Chao, Yuehui [2 ]
Sun, Xinbo [4 ]
He, Chunyan [2 ]
Liang, Xiaohong [2 ]
Xie, Lijuan [1 ]
Han, Liebao [2 ]
机构
[1] Shenzhen Polytech, Sch Appl Chem & Biotechnol, Shenzhen, Peoples R China
[2] Beijing Forestry Univ, Turfgrass Res Inst, Coll Forestry, Beijing, Peoples R China
[3] Wutong Mt Natl Pk, Adm Off, Shenzhen, Peoples R China
[4] Hebei Agr Univ, Key Lab Crop Growth Regulat Hebei Prov, Baoding, Hebei, Peoples R China
来源
PEERJ | 2018年 / 6卷
关键词
Cadmium; Creeping bentgrass; Transcription factors; RNA-Seq; PROTEIN-KINASE GENE; MAIZE ZEA-MAYS; ABSCISIC-ACID; TRANSGENIC EXPRESSION; REGULATORY NETWORKS; DROUGHT TOLERANCE; RICE; OVEREXPRESSION; ACCUMULATION; IRON;
D O I
10.7717/peerj.5191
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cadmium (Cd) toxicity seriously affects the growth and development of plants, so studies on uptake, translocation, and accumulation of Cd in plants are crucial for phytoremediation. However, the molecular mechanism of the plant response to Cd stress remains poorly understood. The main objective of this study was to reveal differentially expressed genes (DEGs) under lower (BT2-5) and higher (BT43) Cd concentration treatments in creeping bentgrass. A total of 463,184 unigenes were obtained from creeping bentgrass leaves using RNA sequencing technology. Observation of leaf tissue morphology showed that the higher Cd concentration damages leaf tissues. Four key transcription factor (TF) families, WRKY, bZIP, ERF, and MYB, are associated with Cd stress in creeping bentgrass. Our findings revealed that these four TFs play crucial roles during the creeping bentgrass response to Cd stress. This study is mainly focused on the molecular characteristics of DEGs under Cd stress using transcriptomic analysis in creeping bentgrass. These results provide novel insight into the regulatory mechanisms of respond to Cd stress and enrich information for phytoremediation.
引用
收藏
页数:22
相关论文
共 75 条
[41]   Genome-Wide Transcriptome Analysis of Cadmium Stress in Rice [J].
Oono, Youko ;
Yazawa, Takayuki ;
Kanamori, Hiroyuki ;
Sasaki, Harumi ;
Mori, Satomi ;
Handa, Hirokazu ;
Matsumoto, Takashi .
BIOMED RESEARCH INTERNATIONAL, 2016, 2016
[42]   Genome-Wide Transcriptome Analysis Reveals that Cadmium Stress Signaling Controls the Expression of Genes in Drought Stress Signal Pathways in Rice [J].
Oono, Youko ;
Yazawa, Takayuki ;
Kawahara, Yoshihiro ;
Kanamori, Hiroyuki ;
Kobayashi, Fuminori ;
Sasaki, Harumi ;
Mori, Satomi ;
Wu, Jianzhong ;
Handa, Hirokazu ;
Itoh, Takeshi ;
Matsumoto, Takashi .
PLOS ONE, 2014, 9 (05)
[43]  
Peralta JR, 2001, B ENVIRON CONTAM TOX, V66, P727
[44]   Heavy metal toxicity: cadmium permeates through calcium channels and disturbs the plant water status [J].
Perfus-Barbeoch, L ;
Leonhardt, N ;
Vavasseur, A ;
Forestier, C .
PLANT JOURNAL, 2002, 32 (04) :539-548
[45]   Over-expression of TaMYB33 encoding a novel wheat MYB transcription factor increases salt and drought tolerance in Arabidopsis [J].
Qin, Yuxiang ;
Wang, Mengcheng ;
Tian, Yanchen ;
He, Wenxing ;
Han, Lu ;
Xia, Guangmin .
MOLECULAR BIOLOGY REPORTS, 2012, 39 (06) :7183-7192
[46]   Overexpression of an ERF transcription factor TSRF1 improves rice drought tolerance [J].
Quan, Ruidang ;
Hu, Shoujing ;
Zhang, Zhili ;
Zhang, Haiwen ;
Zhang, Zhijin ;
Huang, Rongfeng .
PLANT BIOTECHNOLOGY JOURNAL, 2010, 8 (04) :476-488
[47]   Cadmium-induced subcellular accumulation of O2.- and H2O2 in pea leaves [J].
Romero-Puertas, MC ;
Rodríguez-Serrano, M ;
Corpas, FJ ;
Gómez, M ;
Del Río, LA ;
Sandalio, LM .
PLANT CELL AND ENVIRONMENT, 2004, 27 (09) :1122-1134
[48]   The ERF transcription factor TaERF3 promotes tolerance to salt and drought stresses in wheat [J].
Rong, Wei ;
Qi, Lin ;
Wang, Aiyun ;
Ye, Xingguo ;
Du, Lipu ;
Liang, Hongxia ;
Xin, Zhiyong ;
Zhang, Zengyan .
PLANT BIOTECHNOLOGY JOURNAL, 2014, 12 (04) :468-479
[49]   Phytoremediation [J].
Salt, DE ;
Smith, RD ;
Raskin, I .
ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 1998, 49 :643-668
[50]   Cadmium-induced changes in the growth and oxidative metabolism of pea plants [J].
Sandalio, LM ;
Dalurzo, HC ;
Gómez, M ;
Romero-Puertas, MC ;
del Río, LA .
JOURNAL OF EXPERIMENTAL BOTANY, 2001, 52 (364) :2115-2126