Promoting the genomic revolution in Africa through the Nigerian 100K Genome Project

被引:36
作者
Fatumo, Segun [1 ,2 ,3 ]
Yakubu, Aminu [1 ,4 ]
Oyedele, Olubukunola [4 ]
Popoola, Jumi [4 ]
Attipoe, Delali Attiogbe [4 ]
Eze-Echesi, Golibe [4 ]
Modibbo, Fatima Z. [4 ]
Ado-Wanka, Nabila [4 ]
Salako, Omolola [1 ,5 ]
Nashiru, Oyekanmi [1 ,6 ]
Salako, Babatunde L. [1 ,7 ]
O'Dushlaine, Colm [1 ,4 ]
Ene-Obong, Abasi [1 ,4 ]
机构
[1] African Ctr Translat Genom ACTG, NCD GHS Consortium, Lagos, Nigeria
[2] African Computat Genom TACG Res Grp, MRC UVRI & LSHTM, Entebbe, Uganda
[3] London Sch Hyg & Trop Med, Dept Noncommunicable Dis Epidemiol, London, England
[4] 54gene Inc, Washington, DC 02145 USA
[5] Univ Lagos, Coll Med, Dept Radiat Biol Radiotherapy & Radiodiag, Lagos, Nigeria
[6] Natl Biotechnol Dev Agcy NABDA, Ctr Genom Res & Innovat, Abuja, Nigeria
[7] Nigerian Inst Med Res NIMR, Lagos, Nigeria
关键词
DIVERSITY;
D O I
10.1038/s41588-022-01071-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
To leverage the genetic diversity in Nigeria, we established the Non-Communicable Diseases Genetic Heritage Study (NCD-GHS) consortium to help produce a comprehensive catalog of human genetic variation in Nigeria and assess the burden and etiological characteristics of non-communicable diseases in 100,000 adults in Nigeria.
引用
收藏
页码:531 / 536
页数:6
相关论文
共 25 条
[1]   Blueprint for building a biorepository in a resource-limited setting that follows international best practices [J].
Abimiku, Alash'le G. ;
Croxton, Talishea ;
Ozumba, Petronilla J. ;
Agala, Ndidi ;
Balogun, Olasinbo ;
Jonathan, Emmanuel ;
Onyemata, Enzenwa ;
Ndifon, Kachimi ;
Nadoma, Sunji ;
Anazodo, Thankgod ;
Peters, Sam ;
Beiswanger, Christine M. .
AFRICAN JOURNAL OF LABORATORY MEDICINE, 2019, 8 (01)
[2]   Cohort Profile: African Collaborative Center for Microbiome and Genomics Research's (ACCME's) Human Papillomavirus (HPV) and Cervical Cancer Study [J].
Adebamowo, Sally N. ;
Dareng, Eileen O. ;
Famooto, Ayotunde O. ;
Offiong, Richard ;
Olaniyan, Olayinka ;
Obende, Kayode ;
Adebayo, Amos ;
Ologun, Sanni ;
Alabi, Bunmi ;
Achara, Peter ;
Bakare, Rasheed A. ;
Odutola, Michael ;
Olawande, Oluwatoyosi ;
Okuma, James ;
Odonye, George ;
Adebiyi, Ruxton ;
Dakum, Patrick ;
Adebamowo, Clement A. .
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, 2017, 46 (06) :1745-+
[3]   A global reference for human genetic variation [J].
Altshuler, David M. ;
Durbin, Richard M. ;
Abecasis, Goncalo R. ;
Bentley, David R. ;
Chakravarti, Aravinda ;
Clark, Andrew G. ;
Donnelly, Peter ;
Eichler, Evan E. ;
Flicek, Paul ;
Gabriel, Stacey B. ;
Gibbs, Richard A. ;
Green, Eric D. ;
Hurles, Matthew E. ;
Knoppers, Bartha M. ;
Korbel, Jan O. ;
Lander, Eric S. ;
Lee, Charles ;
Lehrach, Hans ;
Mardis, Elaine R. ;
Marth, Gabor T. ;
McVean, Gil A. ;
Nickerson, Deborah A. ;
Wang, Jun ;
Wilson, Richard K. ;
Boerwinkle, Eric ;
Doddapaneni, Harsha ;
Han, Yi ;
Korchina, Viktoriya ;
Kovar, Christie ;
Lee, Sandra ;
Muzny, Donna ;
Reid, Jeffrey G. ;
Zhu, Yiming ;
Chang, Yuqi ;
Feng, Qiang ;
Fang, Xiaodong ;
Guo, Xiaosen ;
Jian, Min ;
Jiang, Hui ;
Jin, Xin ;
Lan, Tianming ;
Li, Guoqing ;
Li, Jingxiang ;
Li, Yingrui ;
Liu, Shengmao ;
Liu, Xiao ;
Lu, Yao ;
Ma, Xuedi ;
Tang, Meifang ;
Wang, Bo .
NATURE, 2015, 526 (7571) :68-+
[4]  
[Anonymous], 2018, About us
[5]   The rising burden of non-communicable diseases in sub-Saharan Africa [J].
Bigna, Jean Joel ;
Noubiap, Jean Jacques .
LANCET GLOBAL HEALTH, 2019, 7 (10) :E1295-E1296
[6]  
Blench R., 2012, ATLAS NIGERIAN LANGU, V3rd
[7]   The UK Biobank resource with deep phenotyping and genomic data [J].
Bycroft, Clare ;
Freeman, Colin ;
Petkova, Desislava ;
Band, Gavin ;
Elliott, Lloyd T. ;
Sharp, Kevin ;
Motyer, Allan ;
Vukcevic, Damjan ;
Delaneau, Olivier ;
O'Connell, Jared ;
Cortes, Adrian ;
Welsh, Samantha ;
Young, Alan ;
Effingham, Mark ;
McVean, Gil ;
Leslie, Stephen ;
Allen, Naomi ;
Donnelly, Peter ;
Marchini, Jonathan .
NATURE, 2018, 562 (7726) :203-+
[8]   High-depth African genomes inform human migration and health [J].
Choudhury, Ananyo ;
Aron, Shaun ;
Botigue, Laura R. ;
Sengupta, Dhriti ;
Botha, Gerrit ;
Bensellak, Taoufik ;
Wells, Gordon ;
Kumuthini, Judit ;
Shriner, Daniel ;
Fakim, Yasmina J. ;
Ghoorah, Anisah W. ;
Dareng, Eileen ;
Odia, Trust ;
Falola, Oluwadamilare ;
Adebiyi, Ezekiel ;
Hazelhurst, Scott ;
Mazandu, Gaston ;
Nyangiri, Oscar A. ;
Mbiyavanga, Mamana ;
Benkahla, Alia ;
Kassim, Samar K. ;
Mulder, Nicola ;
Adebamowo, Sally N. ;
Chimusa, Emile R. ;
Muzny, Donna ;
Metcalf, Ginger ;
Gibbs, Richard A. ;
Rotimi, Charles ;
Ramsay, Michele ;
Adeyemo, Adebowale A. ;
Lombard, Zane ;
Hanchard, Neil A. ;
Matovu, Enock ;
Bucheton, Bruno ;
Hertz-Fowler, Christiane ;
Koffi, Mathurin ;
Macleod, Annette ;
Mumba-Ngoyi, Dieudonne ;
Noyes, Harry ;
Simo, Gustave ;
Simuunza, Martin ;
Botigue, Laura ;
Kumuthini, Judit ;
Adebamowo, Sally N. ;
Adebamowo, Clement ;
Agongo, Godfred ;
Boua, Romuald P. ;
Oduro, Abraham ;
Sorgho, Hermann ;
Landoure, Guida .
NATURE, 2020, 586 (7831) :741-+
[9]   A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3 [J].
Cingolani, Pablo ;
Platts, Adrian ;
Wang, Le Lily ;
Coon, Melissa ;
Tung Nguyen ;
Wang, Luan ;
Land, Susan J. ;
Lu, Xiangyi ;
Ruden, Douglas M. .
FLY, 2012, 6 (02) :80-92
[10]   A roadmap to increase diversity in genomic studies [J].
Fatumo, Segun ;
Chikowore, Tinashe ;
Choudhury, Ananyo ;
Ayub, Muhammad ;
Martin, Alicia R. ;
Kuchenbaecker, Karoline .
NATURE MEDICINE, 2022, 28 (02) :243-250