Trypsin-induced proteome alteration during cell subculture in mammalian cells

被引:230
作者
Huang, Hsiang-Ling [2 ,3 ]
Hsing, Hsiang-Wei [2 ,3 ]
Lai, Tzu-Chia [2 ,3 ]
Chen, Yi-Wen [2 ,3 ]
Lee, Tian-Ren [2 ,3 ]
Chan, Hsin-Tsu [2 ,3 ]
Lyu, Ping-Chiang [2 ,3 ]
Wu, Chieh-Lin [2 ,3 ]
Lu, Ying-Chieh [2 ,3 ]
Lin, Szu-Ting [2 ,3 ]
Lin, Cheng-Wen [4 ]
Lai, Chih-Ho [5 ]
Chang, Hao-Teng [6 ]
Chou, Hsiu-Chuan [1 ]
Chan, Hong-Lin [2 ,3 ]
机构
[1] Natl Hsinchu Univ Educ, Dept Appl Sci, Hsinchu, Taiwan
[2] Natl Tsing Hua Univ, Inst Bioinformat & Struct Biol, Hsinchu, Taiwan
[3] Natl Tsing Hua Univ, Dept Life Sci, Hsinchu, Taiwan
[4] China Med Univ, Dept Med Lab Sci & Biotechnol, Taichung, Taiwan
[5] China Med Univ, Sch Med, Dept Microbiol, Taichung, Taiwan
[6] China Med Univ, Grad Inst Mol Syst Biomed, Taichung, Taiwan
关键词
KINASE DOMAIN; N-CADHERIN; PROTEINS; MUTATION; ERBB2;
D O I
10.1186/1423-0127-17-36
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Background: It is essential to subculture the cells once cultured cells reach confluence. For this, trypsin is frequently applied to dissociate adhesive cells from the substratum. However, due to the proteolytic activity of trypsin, cell surface proteins are often cleaved, which leads to dysregulation of the cell functions. Methods: In this study, a triplicate 2D-DIGE strategy has been performed to monitor trypsin-induced proteome alterations. The differentially expressed spots were identified by MALDI-TOF MS and validated by immunoblotting. Results: 36 proteins are found to be differentially expressed in cells treated with trypsin, and proteins that are known to regulate cell metabolism, growth regulation, mitochondrial electron transportation and cell adhesion are down-regulated and proteins that regulate cell apoptosis are up-regulated after trypsin treatment. Further study shows that bcl-2 is down-regulated, p53 and p21 are both up-regulated after trypsinization. Conclusions: In summary, this is the first report that uses the proteomic approach to thoroughly study trypsin-induced cell physiological changes and provides researchers in carrying out their experimental design.
引用
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页数:10
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