Local Hybrid QM/QM Calculations of Reaction Pathways in Metallobiosites

被引:13
作者
Andrejic, Milica [1 ]
Mata, Ricardo A. [1 ]
机构
[1] Univ Gottingen, Inst Phys Chem, D-37077 Gottingen, Germany
关键词
DENSITY FITTING APPROXIMATIONS; OXYGEN-ATOM TRANSFER; HUMAN SULFITE OXIDASE; AUXILIARY BASIS-SETS; COUPLED-CLUSTER; DMSO REDUCTASE; OXO-TRANSFER; ACTIVE-SITE; CONFIGURATION-INTERACTION; ELECTRON CORRELATION;
D O I
10.1021/ct5008313
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The accurate calculation of activation barriers is fundamental for the modeling of reaction pathways. However, the computational cost of describing electronic correlation at metal sites can be a deterrent. A possible solution to this problem is the use of hybrid QM/QM approaches, which combine different levels of theory in a single calculation. In this way, the metal and its direct vicinity can be treated, for example, with a coupled cluster method, with the remaining system at the MP2 level. We present calculations on two selected molybdenum complexes modeling the active sites of sulfite oxidase and dimethyl sulfoxide reductase. Use is made of the LMOMO scheme, a hybrid QM/QM model that enables the partition of the system directly at the orbital level, thus avoiding the use of model systems. The results show that even when the high-level calculations are restricted to the orbitals directly located at the metal atom, most of the electronic correlation effects are captured.
引用
收藏
页码:5397 / 5404
页数:8
相关论文
共 56 条
  • [1] Study of ligand effects in aurophilic interactions using local correlation methods
    Andrejic, Milica
    Mata, Ricardo A.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2013, 15 (41) : 18115 - 18122
  • [2] [Anonymous], MOLPRO a package of ab initio programs
  • [3] [Anonymous], 1989, J CHEM PHYS
  • [4] Basu P, 2003, CURR SCI INDIA, V84, P1412
  • [5] Quantum Chemical Studies of Mechanisms for Metalloenzymes
    Blomberg, Margareta R. A.
    Borowski, Tomasz
    Himo, Fahmi
    Liao, Rong-Zhen
    Siegbahn, Per E. M.
    [J]. CHEMICAL REVIEWS, 2014, 114 (07) : 3601 - 3658
  • [6] COMPARISON OF THE BOYS AND PIPEK-MEZEY LOCALIZATIONS IN THE LOCAL CORRELATION APPROACH AND AUTOMATIC VIRTUAL BASIS SELECTION
    BOUGHTON, JW
    PULAY, P
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1993, 14 (06) : 736 - 740
  • [7] A new ONIOM implementation in Gaussian98.: Part I.: The calculation of energies, gradients, vibrational frequencies and electric field derivatives
    Dapprich, S
    Komáromi, I
    Byun, KS
    Morokuma, K
    Frisch, MJ
    [J]. JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 1999, 461 : 1 - 21
  • [8] Application of Local Second-Order Moller-Plesset Perturbation Theory to the Study of Structures in Solution
    Dieterich, Johannes M.
    Oliveira, Joao C. A.
    Mata, Ricardo A.
    [J]. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2012, 8 (09) : 3053 - 3060
  • [9] Reductive half-reaction of aldehyde oxidoreductase toward acetaldehyde: Ab initio and free energy quantum mechanical/molecular mechanical calculations
    Dieterich, Johannes M.
    Werner, Hans-Joachim
    Mata, Ricardo A.
    Metz, Sebastian
    Thiel, Walter
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2010, 132 (03)
  • [10] Human sulfite oxidase R160Q: Identification of the mutation in a sulfite oxidase-deficient patient and expression and characterization of the mutant enzyme
    Garrett, RM
    Johnson, JL
    Graf, TN
    Feigenbaum, A
    Rajagopalan, KV
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (11) : 6394 - 6398