CircRNA profiling identifies circRNF180 as a tumor suppressor in hepatocellular carcinoma

被引:8
作者
Zeng, Xi [1 ,2 ]
Tan, Chao [3 ,4 ]
Mo, Meile [3 ]
Qin, Xiaoling [5 ]
Ma, Xiaoyun [3 ]
Huang, Kaiyong [1 ]
Wang, Xiaomin [3 ]
Liang, Wenjie [6 ]
Yang, Li [1 ]
机构
[1] Guangxi Med Univ, Sch Publ Hlth, Dept Occupat & Environm Hlth, Nanning, Peoples R China
[2] Guilin Med Univ, Sch Publ Hlth, Dept Occupat & Environm Hlth, Guilin, Peoples R China
[3] Guangxi Med Univ, Sch Publ Hlth, Dept Epidemiol & Hlth Stat, Nanning, Peoples R China
[4] Guilin Med Univ, Sch Publ Hlth, Dept Epidemiol & Stat, Guilin, Peoples R China
[5] Guangxi Univ Chinese Med, Sch Publ Hlth & Management, Dept Biostat, Nanning, Peoples R China
[6] Guangxi Med Univ, Sch Publ Hlth, Dept Social Med, Nanning, Peoples R China
关键词
circRNF180; circRNA; hepatocellular carcinoma; RNA sequencing; tumor suppressor; CIRCULAR RNAS; MICROVASCULAR INVASION; VASCULAR INVASION; EXPRESSION; DATABASE; PROGRESSION; METASTASIS; SURVIVAL;
D O I
10.2217/epi-2020-0385
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Aim: To explore the expression profiles and functions of circRNAs in hepatocellular carcinoma (HCC). Materials & methods: We obtained circRNA expression profiles through RNA sequencing. Expression levels of circRNAs were confirmed by quantitative real-time PCR. The effects on HCC progression were determined using Cell Counting Kit 8, clone formation and transwell assays. Results: We identified 114 upregulated and 144 downregulated circRNAs in HCC tissues. The results of quantitative real-time PCR showed that circGNAO1, circRNF180 and circMERTK were significantly downregulated in HCC tissues, whereas circSNX6 was significantly upregulated. CircRNF180 was associated with microvascular invasion. Overexpression of circRNF180 inhibits the proliferation, colony formation, migration and invasion of HCC cells. Conclusion: CircRNF180 may function as a tumor suppressor and could serve as a potential biomarker and therapeutic target in HCC.
引用
收藏
页码:513 / 530
页数:18
相关论文
共 40 条
[1]   From NASH to HCC: current concepts and future challenges [J].
Anstee, Quentin M. ;
Reeves, Helen L. ;
Kotsiliti, Elena ;
Govaere, Olivier ;
Heikenwalder, Mathias .
NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY, 2019, 16 (07) :411-428
[2]   CircRNAs and cancer: Biomarkers and master regulators [J].
Arnaiz, Esther ;
Sole, Carla ;
Manterola, Lorea ;
Iparraguirre, Leire ;
Otaegui, David ;
Lawrie, Charles H. .
SEMINARS IN CANCER BIOLOGY, 2019, 58 :90-99
[3]   miR-182-5p promotes hepatocellular carcinoma progression by repressing FOXO3a [J].
Cao, Man-Qing ;
You, A-Bin ;
Zhu, Xiao-Dong ;
Zhang, Wei ;
Zhang, Yuan-Yuan ;
Zhang, Shi-Zhe ;
Zhang, Ke-wei ;
Cai, Hao ;
Shi, Wen-Kai ;
Li, Xiao-Long ;
Li, Kang-Shuai ;
Gao, Dong-Mei ;
Ma, De-Ning ;
Ye, Bo-Gen ;
Wang, Cheng-Hao ;
Qin, Cheng-Dong ;
Sun, Hui-Chuan ;
Zhang, Ti ;
Tang, Zhao-You .
JOURNAL OF HEMATOLOGY & ONCOLOGY, 2018, 11
[4]   The biogenesis and emerging roles of circular RNAs [J].
Chen, Ling-Ling .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2016, 17 (04) :205-211
[5]   The microRNA-183 cluster: the family that plays together stays together [J].
Dambal, Shweta ;
Shah, Mit ;
Mihelich, Brittany ;
Nonn, Larisa .
NUCLEIC ACIDS RESEARCH, 2015, 43 (15) :7173-7188
[6]   CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs [J].
Dudekulay, Dawood B. ;
Panda, Amaresh C. ;
Grammatikakis, Ioannis ;
De, Supriyo ;
Abdelmohsen, Kotb ;
Gorospe, Myriam .
RNA BIOLOGY, 2016, 13 (01) :34-42
[7]   miRWalk - Database: Prediction of possible miRNA binding sites by "walking" the genes of three genomes [J].
Dweep, Harsh ;
Sticht, Carsten ;
Pandey, Priyanka ;
Gretz, Norbert .
JOURNAL OF BIOMEDICAL INFORMATICS, 2011, 44 (05) :839-847
[8]   Risk factors and prevention of hepatocellular carcinoma in the era of precision medicine [J].
Fujiwara, Naoto ;
Friedman, Scott L. ;
Goossens, Nicolas ;
Hoshida, Yujin .
JOURNAL OF HEPATOLOGY, 2018, 68 (03) :526-549
[9]   CIRI: an efficient and unbiased algorithm for de novo circular RNA identification [J].
Gao, Yuan ;
Wang, Jinfeng ;
Zhao, Fangqing .
GENOME BIOLOGY, 2015, 16
[10]   Circular RNA circMTO1 Acts as the Sponge of MicroRNA-9 to Suppress Hepatocellular Carcinoma Progression [J].
Han, Dan ;
Li, Jiangxue ;
Wang, Huamin ;
Su, Xiaoping ;
Hou, Jin ;
Gu, Yan ;
Qian, Cheng ;
Lin, Yun ;
Liu, Xiang ;
Huang, Mingyan ;
Li, Nan ;
Zhou, Weiping ;
Yu, Yizhi ;
Cao, Xuetao .
HEPATOLOGY, 2017, 66 (04) :1151-1164