A Novel Approach towards Biochemical Synthesis on Cyberphysical Digital Microfluidic Biochip

被引:9
作者
Chakraborty, Sarit [1 ]
Chakraborty, Susanta [1 ]
机构
[1] Indian Inst Engn Sci & Technol, Comp Sci & Technol, Sibpur, Howrah, India
来源
2017 30TH INTERNATIONAL CONFERENCE ON VLSI DESIGN AND 2017 16TH INTERNATIONAL CONFERENCE ON EMBEDDED SYSTEMS (VLSID 2017) | 2017年
关键词
Digital Microfluidics; Cyberphysical; Modules; Synthesis; ERROR RECOVERY;
D O I
10.1109/VLSID.2017.44
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Digital Microfluidic Biochip (DMFB) consists of Two-Dimensional (2-D) microarrays that can perform many diagnostic tests simultaneously. DMFB's are expected to be combined with cyberphysical systems in near future. Thus faster and error-free synthesis techniques need to be implemented on such chips. Synthesis of various bio-protocols is generally performed based on various mixing modules present on the chip. In this work, the concept of such dedicated virtual modules has been eliminated and a novel Module-Less-Synthesis (MLS) method is proposed for accomplishing bioassays in cyber physical DMFB. We have proposed different directional-shifts (movements) of droplet and computed the percentage of mixing accomplishment for each directional-shift of the droplet. We have also identified various shift-patterns (movements) to accomplish entire mixing in lesser time compared to earlier synthesis methods and also include an error recovery approach for cyberphysical DMFB. Experimental results on real life bioassay like PCR and on synthetic benchmark show improved synthesis performance with bioassay completion time (t(max)) significantly reduced from earlier module-based synthesis techniques.
引用
收藏
页码:355 / 360
页数:6
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