Escherichia coli β-galactosidase recognizes a high-energy conformation of C-lactose, a nonhydrolizable substrate analogue.: NMR and modeling studies of the molecular complex

被引:111
作者
Espinosa, JF
Montero, E
Vian, A
García, JL
Dietrich, H
Schmidt, RR
Martín-Lomas, M
Imberty, A
Cañada, FJ
Jiménez-Barbero, J
机构
[1] CSIC, Inst Quim Organ, Dept Quim Organ Biol, E-28006 Madrid, Spain
[2] CSIC, Ctr Invest Biol, E-28006 Madrid, Spain
[3] Univ Konstanz, Fak Chem, D-7750 Constance, Germany
[4] CSIC, Inst Invest Quim, E-41080 Seville, Spain
[5] CNRS, CERMAV, Grenoble, France
关键词
D O I
10.1021/ja972291q
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The enzyme-bound conformation of C-lactose, an Escherichia coli beta-galactosidase inhibitor has been determined by NMR spectroscopy. It is demonstrated that the enzyme selects a high-energy conformation of this closely related structural analogue of the natural substrate, lactose. In addition, a molecular modeling protocol has been performed in order to obtain a detailed three-dimensional structure of the complex that can explain, in structural terms, the role that the key amino acid residues play in the catalytic mechanism. The implications of the recognition of a high-energy conformation of the analogue are also outlined.
引用
收藏
页码:1309 / 1318
页数:10
相关论文
共 47 条
[1]   THE FUNCTION OF THE 5-HYDROXYMETHYL GROUP OF LACTOSE IN ENZYMATIC-HYDROLYSIS WITH BETA-GALACTOSIDASE FROM ESCHERICHIA-COLI [J].
ADELHORST, K ;
BOCK, K .
ACTA CHEMICA SCANDINAVICA, 1992, 46 (11) :1114-1121
[2]   The crystal structure of endoglucanase CelA, a family 8 glycosyl hydrolase from Clostridium thermocellum [J].
Alzari, PM ;
Souchon, H ;
Dominguez, R .
STRUCTURE, 1996, 4 (03) :265-275
[3]   STUDIES OF THE BOUND CONFORMATIONS OF METHYL ALPHA-LACTOSIDE AND METHYL BETA-ALLOLACTOSIDE TO RICIN-B CHAIN USING TRANSFERRED NOE EXPERIMENTS IN THE LABORATORY AND ROTATING FRAMES, ASSISTED BY MOLECULAR MECHANICS AND DYNAMICS CALCULATIONS [J].
ASENSIO, JL ;
CANADA, FJ ;
JIMENEZBARBERO, J .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1995, 233 (02) :618-630
[4]  
ASENSIO JL, 1995, EUR J BIOCHEM, V230, P621
[5]   SITE-DIRECTED MUTAGENIC REPLACEMENT OF GLU-461 WITH GLN IN BETA-GALACTOSIDASE (ESCHERICHIA-COLI) - EVIDENCE THAT GLU-461 IS IMPORTANT FOR ACTIVITY [J].
BADER, DE ;
RING, M ;
HUBER, RE .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1988, 153 (01) :301-306
[6]   SUR LE CALCUL DES CARACTERISTIQUES DU SQUELETTE SIGMA DES MOLECULES CONJUGUEES [J].
BERTHOD, H ;
PULLMAN, A .
JOURNAL DE CHIMIE PHYSIQUE, 1965, 62 (09) :942-&
[7]   DERIVATIVES OF METHYL BETA-LACTOSIDE AS SUBSTRATES FOR AND INHIBITORS OF BETA-D-GALACTOSIDASE FROM E-COLI [J].
BOCK, K ;
ADELHORST, K .
CARBOHYDRATE RESEARCH, 1990, 202 :131-149
[8]   A perspective on biological catalysis [J].
Cannon, WR ;
Singleton, SF ;
Benkovic, SJ .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (10) :821-833
[9]  
CUPPLES CG, 1990, J BIOL CHEM, V265, P5512
[10]   STRUCTURES AND MECHANISMS OF GLYCOSYL HYDROLASES [J].
DAVIES, G ;
HENRISSAT, B .
STRUCTURE, 1995, 3 (09) :853-859