piggyPrime: High-Efficacy Prime Editing in Human Cells Using piggyBac-Based DNA Transposition

被引:12
作者
Wolff, Jonas Holst [1 ]
Haldrup, Jakob [1 ]
Thomsen, Emil Aagaard [1 ]
Andersen, Sofie [1 ]
Mikkelsen, Jacob Giehm [1 ]
机构
[1] Aarhus Univ, Dept Biomed, Aarhus, Denmark
来源
FRONTIERS IN GENOME EDITING | 2021年 / 3卷
关键词
prime editing; CRISPR; prime editing guide RNA; pegRNA; piggyBac; DNA transposition; KNOCKOUT;
D O I
10.3389/fgeed.2021.786893
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Prime editing is a novel genome editing technology that allows a wide range of tailored genomic alterations. Prime editing does not involve homologous recombination, but suffers from low efficacy. Here, we demonstrate piggyPrime, a transfected single-vector system based on piggyBac DNA transposition for genomic integration of all prime editing components in human cells allowing easy and effective transgenesis with prime editing efficacies up to 100% in cell lines.
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页数:7
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共 21 条
[1]   pegIT - a web-based design tool for prime editing [J].
Anderson, Mads Valdemar ;
Haldrup, Jakob ;
Thomsen, Emil Aagaard ;
Wolff, Jonas Holst ;
Mikkelsen, Jacob Giehm .
NUCLEIC ACIDS RESEARCH, 2021, 49 (W1) :W505-W509
[2]   Search-and-replace genome editing without double-strand breaks or donor DNA [J].
Anzalone, Andrew V. ;
Randolph, Peyton B. ;
Davis, Jessie R. ;
Sousa, Alexander A. ;
Koblan, Luke W. ;
Levy, Jonathan M. ;
Chen, Peter J. ;
Wilson, Christopher ;
Newby, Gregory A. ;
Raguram, Aditya ;
Liu, David R. .
NATURE, 2019, 576 (7785) :149-+
[3]   Deconvolution of Complex DNA Repair (DECODR): Establishing a Novel Deconvolution Algorithm for Comprehensive Analysis of CRISPR-Edited Sanger sequencing Data [J].
Bloh, Kevin ;
Kanchana, Rohan ;
Bialk, Pawel ;
Banas, Kelly ;
Zhang, Zugui ;
Yoo, Byung-Chun ;
Kmiec, Eric B. .
CRISPR JOURNAL, 2021, 4 (01) :120-131
[4]   Precise correction of Duchenne muscular dystrophy exon deletion mutations by base and prime editing [J].
Chemello, F. ;
Chai, A. C. ;
Li, H. ;
Rodriguez-Caycedo, C. ;
Sanchez-Ortiz, E. ;
Atmanli, A. ;
Mireault, A. A. ;
Liu, N. ;
Bassel-Duby, R. ;
Olson, E. N. .
SCIENCE ADVANCES, 2021, 7 (18)
[5]   In Vivo Knockout of the Vegfa Gene by Lentiviral Delivery of CRISPR/Cas9 in Mouse Retinal Pigment Epithelium Cells [J].
Holmgaard, Andreas ;
Askou, Anne Louise ;
Benckendorff, Josephine Natalia Esther ;
Thomsen, Emil Aagaard ;
Cai, Yujia ;
Bek, Toke ;
Mikkelsen, Jacob Giehm ;
Corydon, Thomas J. .
MOLECULAR THERAPY-NUCLEIC ACIDS, 2017, 9 :89-99
[6]   Application of prime editing to the correction of mutations and phenotypes in adult mice with liver and eye diseases [J].
Jang, Hyewon ;
Jo, Dong Hyun ;
Cho, Chang Sik ;
Shin, Jeong Hong ;
Seo, Jung Hwa ;
Yu, Goosang ;
Gopalappa, Ramu ;
Kim, Daesik ;
Cho, Sung-Rae ;
Kim, Jeong Hun ;
Kim, Hyongbum Henry .
NATURE BIOMEDICAL ENGINEERING, 2022, 6 (02) :181-+
[7]   RNA-programmed genome editing in human cells [J].
Jinek, Martin ;
East, Alexandra ;
Cheng, Aaron ;
Lin, Steven ;
Ma, Enbo ;
Doudna, Jennifer .
ELIFE, 2013, 2
[8]   A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity [J].
Jinek, Martin ;
Chylinski, Krzysztof ;
Fonfara, Ines ;
Hauer, Michael ;
Doudna, Jennifer A. ;
Charpentier, Emmanuelle .
SCIENCE, 2012, 337 (6096) :816-821
[9]   Adenine base editing and prime editing of chemically derived hepatic progenitors rescue genetic liver disease [J].
Kim, Yohan ;
Hong, Sung-Ah ;
Yu, Jihyeon ;
Eom, Jeongyun ;
Jang, Kiseok ;
Yoon, Sangtae ;
Hong, Da Hee ;
Seo, Daekwan ;
Lee, Seu-Na ;
Woo, Jae-Sung ;
Jeong, Jaemin ;
Bae, Sangsu ;
Choi, Dongho .
CELL STEM CELL, 2021, 28 (09) :1614-+
[10]   Systematic determination of the packaging limit of lentiviral vectors [J].
Kumar, M ;
Keller, B ;
Makalou, N ;
Sutton, RE .
HUMAN GENE THERAPY, 2001, 12 (15) :1893-1905