The neglected functions of intrinsically disordered proteins and the origin of life

被引:14
|
作者
Jaeken, Laurent [1 ,2 ]
机构
[1] Antwerp Univ Assoc, Karel de Grote Hgsk Univ Coll, Dept Ind Sci & Technol, Lab Biochem, Salesianenlaan 30, B-2660 Hoboken, Belgium
[2] Ploegsebaan 26, B-2930 Brasschaat, Belgium
关键词
Intrinsically disordered proteins; New functions; Energetic; Coherence; Origin of life; NUCLEAR-MAGNETIC-RESONANCE; MEMBRANE PUMP THEORY; BLOOD-CELL GHOSTS; PHYSICAL STATE; ADENOSINE-TRIPHOSPHATASE; UNSTRUCTURED PROTEINS; NANO-PROTOPLASM; WATER DYNAMICS; LIVING CELLS; MUSCLE;
D O I
10.1016/j.pbiomolbio.2017.03.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The example of gelatine shows that extended proteins behave quite differently than globular ones: with water they form a gel. Historically the colloid view of protoplasm was discredited in favour of membrane (pump)-theory (MPT), but unjustified. In his association-induction hypothesis Ling demonstrates that MPT is full of contradictions and that the colloid view has to be re-considered. In that case IDP's play a crucial role in this. What Ling calls the 'living state' consists of the unitary protoplasmic structure from which it was experimentally demonstrated that it can survive and keep Na+ and K+ concentrations without a delineating membrane. It consists of unfolded polypeptide chains whereby the repetitive backbone peptide groups orient and polarise many layers of water, in which Na+ and other solutes have reduced solubility and whereby the polypeptide beta- and gamma-carboxyl-groups adsorb K+. This 'associated' state is the resting state: a coherent high-energy low-entropy meta-stable state. It can be kept by adsorbed ATP (NTP) eventually for years without consumption of ATP as demonstrated by Clegg on Artemia embryo's. Stimuli can transform this state into a lower-energy higher-entropy action state with dissociation of ADP and Pi and newly synthesised ATP can reinstall it. Rest-to-action and action-to-rest were shown to be real phase-shifts. Ling's theory is a complete quantitative theory with corroborated equations for solute distribution, transport, cell potentials and osmotic behaviour and describing the cell's energy cycle. IDP's are involved in all this. The new view on IDP's leads to new insights on the origin of life. (C) 2017 Elsevier Ltd. All rights reserved.
引用
收藏
页码:31 / 46
页数:16
相关论文
共 50 条
  • [41] Proline Fingerprint in Intrinsically Disordered Proteins
    Murrali, Maria Grazia
    Piai, Alessandro
    Bermel, Wolfgang
    Felli, Isabella C.
    Pierattelli, Roberta
    CHEMBIOCHEM, 2018, 19 (15) : 1625 - 1629
  • [42] Allosteric Modulation of Intrinsically Disordered Proteins
    Rehman, Ashfaq Ur
    Rahman, Mueed Ur
    Arshad, Taaha
    Chen, Hai-Feng
    PROTEIN ALLOSTERY IN DRUG DISCOVERY, 2019, 1163 : 335 - 357
  • [43] MobiDB: intrinsically disordered proteins in 2021
    Piovesan, Damiano
    Necci, Marco
    Escobedo, Nahuel
    Monzon, Alexander Miguel
    Hatos, Andras
    Micetic, Ivan
    Quaglia, Federica
    Paladin, Lisanna
    Ramasamy, Pathmanaban
    Dosztanyi, Zsuzsanna
    Vranken, Wim F.
    Davey, Norman E.
    Parisi, Gustavo
    Fuxreiter, Monika
    Tosatto, Silvio C. E.
    NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) : D361 - D367
  • [44] Intrinsically disordered regions in autophagy proteins
    Mei, Yang
    Su, Minfei
    Soni, Gaurav
    Salem, Saeed
    Colbert, Christopher L.
    Sinha, Sangita C.
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2014, 82 (04) : 565 - 578
  • [45] Intrinsically Disordered Proteins in Chronic Diseases
    Kulkarni, Prakash
    Uversky, Vladimir N.
    BIOMOLECULES, 2019, 9 (04):
  • [46] Intrinsically disordered proteins as molecular shields
    Chakrabortee, Sohini
    Tripathi, Rashmi
    Watson, Matthew
    Schierle, Gabriele S. Kaminski
    Kurniawan, Davy P.
    Kaminski, Clemens F.
    Wise, Michael J.
    Tunnacliffe, Alan
    MOLECULAR BIOSYSTEMS, 2012, 8 (01) : 210 - 219
  • [47] The dynamic function of intrinsically disordered proteins
    Milles S.
    BIOspektrum, 2023, 29 (4) : 351 - 353
  • [48] Computer Simulations of Intrinsically Disordered Proteins
    Chong, Song-Ho
    Chatterjee, Prathit
    Ham, Sihyun
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 68, 2017, 68 : 117 - 134
  • [49] The roles of intrinsically disordered proteins in neurodegeneration
    Utami, Kagistia Hana
    Morimoto, Satoru
    Mitsukura, Yasue
    Okano, Hideyuki
    BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2025, 1869 (04):
  • [50] AlphaFold and Implications for Intrinsically Disordered Proteins
    Ruff, Kiersten M.
    Pappu, Rohit, V
    JOURNAL OF MOLECULAR BIOLOGY, 2021, 433 (20)