Evaluation of the FilmArray Blood Culture Identification Panel: Results of a Multicenter Controlled Trial

被引:182
作者
Salimnia, Hossein [1 ,2 ]
Fairfax, Marilynn R. [1 ,2 ]
Lephart, Paul R. [2 ]
Schreckenberger, Paul [3 ]
DesJarlais, Sharon M. [3 ]
Johnson, J. Kristie [4 ]
Robinson, Gwen [4 ]
Carroll, Karen C. [5 ]
Greer, Amy [5 ]
Morgan, Margie [6 ]
Chan, Raymond [6 ]
Loeffelholz, Michael [7 ]
Valencia-Shelton, Frances [7 ,12 ]
Jenkins, Stephen [8 ]
Schuetz, Audrey N. [8 ]
Daly, Judy A. [9 ,10 ]
Barney, Trenda [9 ,10 ]
Hemmert, Andrew [11 ]
Kanack, Kristen J. [11 ]
机构
[1] Wayne State Univ, Sch Med, Dept Pathol, Detroit, MI 48201 USA
[2] DMC Univ Labs, Detroit, MI USA
[3] Loyola Univ, Med Ctr, Chicago, IL 60611 USA
[4] Univ Maryland, Dept Pathol, Baltimore, MD 21201 USA
[5] Johns Hopkins Univ, Sch Med, Dept Pathol, Div Med Microbiol, Baltimore, MD 21205 USA
[6] Cedars Sinai Med Ctr, Los Angeles, CA 90048 USA
[7] Univ Texas Med Branch, Dept Pathol, Galveston, TX 77555 USA
[8] New York Presbyterian Hosp, Weill Cornell Med Ctr, New York, NY USA
[9] Univ Utah, Dept Pathol, Salt Lake City, UT USA
[10] Primary Childrens Med Ctr, Salt Lake City, UT 84103 USA
[11] BioFire Diagnost LLC, Salt Lake City, UT USA
[12] Univ Rochester, Med Ctr, Strong Mem Hosp, Clin Microbiol Labs, Rochester, NY 14642 USA
关键词
RAPID IDENTIFICATION; ANTIMICROBIAL THERAPY; PSEUDOMONAS-AERUGINOSA; ANTIBIOTIC-TREATMENT; CLINICAL IMPACT; SEVERE SEPSIS; PCR ASSAY; INFECTIONS; PATHOGENS; SURVIVAL;
D O I
10.1128/JCM.01679-15
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Sepsis is a major cause of morbidity, mortality, and increased medical expense. Rapid diagnosis improves outcomes and reduces costs. The FilmArray blood culture identification panel (BioFire Diagnostics LLC, Salt Lake City, UT), a highly multiplexed PCR assay, can identify 24 etiologic agents of sepsis (8 Gram-positive, 11 Gram-negative, and 5 yeast species) and three antimicrobial resistance genes (mecA, vanA/B, and bla(KPC)) from positive blood culture bottles. It provides results in about 1 h with 2 min for assay setup. We present the results of an eight-center trial comparing the sensitivity and specificity of the panel with those of the laboratories' standard phenotypic identification techniques, as well as with molecular methods used to distinguish Acinetobacter baumannii from other members of the A. calcoaceticus-A. baumannii complex and to detect antimicrobial resistance genes. Testing included 2,207 positive aerobic blood culture samples, 1,568 clinical and 639 seeded. Samples were tested fresh or were frozen for later testing within 8 h after the bottles were flagged as positive by an automated blood culture system. At least one organism was detected by the panel in 1,382 (88.1%) of the positive clinical specimens. The others contained primarily off-panel organisms. The panel reported multiple organisms in 81 (5.86%) positive clinical specimens. The unresolved blood culture identification sensitivity for all target detections exceeded 96%, except for Klebsiella oxytoca (92.2%), which achieved 98.3% sensitivity after resolution of an unavoidable phenotypic error. The sensitivity and specificity for vanA/B and bla(KPC) were 100%; those for mecA were 98.4 and 98.3%, respectively.
引用
收藏
页码:687 / 698
页数:12
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